Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00069 TTATGATTGGAGGAGCTAATGTGTGGCTAAACCAGGTAAGAAGTCAGCGGAAGAGTAAGAATGAATCGATTAGGAAAGAGAGAAAGAGAGAAAGGATGGGTTGTTGCCAATCATCGAAGTTGCTGAGAGTAGGAGAGAGGGAGACACACCCGGAGAAGGTGAAGGAAAGGGAAAAAGAGGAAGCGTACGGAAAGCAACAGGAGAGGGGGTCAGAGGGAGAGGGGGAGGAGCTGGATTTCTCGTTTTCGGAGTTCTCCTTGGCGGAACTGAAGGGGGCAACCAACAATTTCAGCTCGGAGTATATCGTATCGGAGAGCGGGGAGAAGGCTCCGAACCTGGTTTACAAGGGTCGCCTCCAGAATCAGAGCCGTTGGATTGCGGTTAAGAAGTTCAGCAAGTCAGCTTGGCCGGATCCCAAGCAATTCGTTGAGGAGGCTTCCGGTGTTGGCAAGTTGCGCCACCCCAGGCTTGCTAATTTGATCGGTTACTGCTGCGACGGCGACGAGAGGCTCCTTGTCGCCGAGTACATGCCCAATGACACTCTCGCCAAGCATCTCTTCCACTGGGAAACTCAGACTATTGAGTGGGCCATGCGTTTGCGCGTCGCTCTTTACATCGCACAGGCTTTGCATTATTGCAGTTCTGAGGGTCGCCCTTTGTACCACGACTTGAATGCTTACCGCGTTCTCTTCGACCACGATGGTGATCCTCGTCTCTCTTGTTTTGGTTTCATGAAGAACAGCAGGGATGGCAAGAGTTATAGCACCAATCTTGCTTACACTCCTCCCGAATATTTAAGAAACGGAAGGGTCACCCCTGAGAGTGTCATTTACAGCTTTGGAACCGTTCTTCTTGACCTCCTCAGTGGCAAGCACATCCCTCCCAGTCATGCACTTGATATGATACAGGGGAAAAACAATATGCTCTTGATGGATTCACATTTGGAGGGAAAGTTTTCTACCGAAGAGGCAACGGTTGTCGTTAACCTTGCCTCTAAATGTTTGCAATATGAGCCGAGGGAGCGACCTGATACGAAGGATTTGGTCACAACACTTGCCCCTTTGCATACAAAACCCGATGTTCCTTCTCACAAAATGCTTGTAATTCCAAAGCATGAGGAAGCTCCATCGACGCCACAACGACCTCTTTCGGCAATGGGTGAGGCTTGTTCAAGAATGGACCTAACTGCAATACATCAGATCTTGGTTGCGACACACTACAGAGACGATGAAGGAACTAATGAGTTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCGAGAAAGCGAGGAGACTATGCATTCCGTGACAAGGACTTTAAGACTGCCATTGATAACTATTCCCAGTTTATTGATGTGGGAACGATGGTCTCCCCAACTGTTTTTGCAAGGCGTAGTCTGTGCTATCTGTTATGTGATCAGCCAGATCCTGCGCTACGAGATGCAATGCAAGCACAGTGTGTTCTTCCAGACTGGCCTACGGCTTTCTACATGCAATCGGTTGCTCTTGCAAAGCTGGACATGCACAAGGATGCGGCTGATATGTTAAACGAGGCAGCTGCATTGGAAGAGAAGAGACAAAGAGGAGCGAGAGGATCATAGATTTATGCAGTGGGGCTAATTTGAGCGTGTCAAGTTCTGTATAAAGGTTGAGCTGGGAAGCAAGACTAACATTTGAATCTGAGTTTAAAATGTGTCAGAGAAATACAACACTGGTGGAGTAGATGGCCCATGCACTTTATTTCACCATCTTATAGGAATCGGTCACAACTTGAAAACTGTGCTTATGCACACTAAATTGGGAAGGAATACCGGTCATTTTTCCATTGTCAATGAAATTGATTGTTTGATGCCTACTCGGCTAATGTCAACCCAACATGGTGTTTATTGAGGTTTCTAAGTTTTAACTCCTCACTGGTGTTCATAATATTATTTTATGTCCGCATAATCTACATGGAATAATAGTAATAGTAACACATTTGCAATCTCTCTACATGTAATACTCCATTAGTCTGGAATGTTAAAAGCCGATTCAAACCGG 2052 0.4664 MIGGANVWLNQVRSQRKSKNESIRKERKRERMGCCQSSKLLRVGERETHPEKVKEREKEEAYGKQQERGSEGEGEELDFSFSEFSLAELKGATNNFSSEYIVSESGEKAPNLVYKGRLQNQSRWIAVKKFSKSAWPDPKQFVEEASGVGKLRHPRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWETQTIEWAMRLRVALYIAQALHYCSSEGRPLYHDLNAYRVLFDHDGDPRLSCFGFMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPDTKDLVTTLAPLHTKPDVPSHKMLVIPKHEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVLPDWPTAFYMQSVALAKLDMHKDAADMLNEAAALEEKRQRGARGS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00069 536 Gene3D Transferase(Phosphotransferase) domain 1 177 368 - -
Pste8g00069 536 FunFam probable serine/threonine-protein kinase At4g35230 71 175 - -
Pste8g00069 536 FunFam probable serine/threonine-protein kinase At5g41260 177 368 - -
Pste8g00069 536 MobiDBLite consensus disorder prediction 17 35 - -
Pste8g00069 536 Gene3D Phosphorylase Kinase; domain 1 71 175 - -
Pste8g00069 536 Coils Coil 9 29 - -
Pste8g00069 536 Gene3D Tetratricopeptide repeat domain 425 534 IPR011990 GO:0005515
Pste8g00069 536 MobiDBLite consensus disorder prediction 1 76 - -
Pste8g00069 536 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 51 531 IPR045845 GO:0004672|GO:0009742
Pste8g00069 536 FunFam probable serine/threonine-protein kinase At4g35230 425 534 - -
Pste8g00069 536 ProSiteProfiles Protein kinase domain profile. 99 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00069 536 MobiDBLite consensus disorder prediction 42 75 - -
Pste8g00069 536 SUPERFAMILY TPR-like 428 529 IPR011990 GO:0005515
Pste8g00069 536 SUPERFAMILY Protein kinase-like (PK-like) 79 363 IPR011009 -
Pste8g00069 536 Pfam Protein kinase domain 112 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00069 Pste-Chr8 416784 426335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00069 47 375 Glycoside Hydrolase AT3G07070 32.764 1.93e-48 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pste8g00069 Pkinase 5.1e-27 CL0016