Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste8g00065 | CTCCTCAGGTGCTGTTCCCACTCAATAATAACATTAACAACTCCATCACTTCGCTTCTCACACTCACTCACTCACTCACTCACTCTCTGTTTTTTCCTCGCTCCTAGGGTTCACGCTTTTCGTATTTCCTCATTCTCTATCTCGCTTCCCCGTTTTCTTCACTGACTCTCATCGGTGTGAGTGTTCTCGCATGTTAGGGATTTCAAGAGATGCAGAGCGCGTGGCAGAGGAAATGTGATTCGCCGTTTCAGCAGCCGTCGACGTCGGCCGCGGTTCCGTCTGCACCGTCGCCGGAGCAGGATATGAATGCAAGCTATGGTCTACCACAAGTTGCTCATGCTTTAAGATCAAAATTTGTTGGAGGGAATCATGGCCTTGTTAACCCAAGCTTTCCCCACTCAACCACCCATGGACCATGCCAATCTGATACTGGAAACTCATTACAGTCTCTCCTTTATGATCCTCCATCCTCGTTACAGTACAATTTTCAAGATTTGTTTGATCGCAAGCTTTGCATCTCATCTGGAGATTGTACTGCTGCTATTGGTAATTCTGTTGTTAGTTCTATAGAAAGTGGGACCTTCCCTACATCTAGTGTAGGGTTGGTGACAGAAAGTTTAATTAACTGTAACCTGCAAAATTGGGCGACAACTTTTCCTGAGATTTCTTCCAGTGCAATAGTTGGTCTGAATAATATTAGTAATTTTGTCTTCCACGATACTCAGAGTAGCAATACTGCTACTAAACCCACAGTTGCCAGTGGTGACAAAGCAAGGGAGTCTGAAGGTCATCGCCAAGGTGCAAACACTGCATGTAGTCTAAATGTTTGCTGCTCAGACATTCAAACTACCCCAAATATTGCTTTAGAACAAAGCTCATCTAAGTATACAACTCCTTCCATGAGTGGCTTTCCTCGGGTGTTCTGCATGGGGAAAAGTGGCCATCTTCTTCTTAGCAATACTGGGCTTCTTGGAATTGTTTGTTCATGCCATTGTTGGCACATGTCTGTTCTTAAGTTTTGTGAGCATTGCGGGTTACATGGTGTTGACCCGGGGGATGCTGTTTATATGGAAAGTGGGGAGACCATTTCACAATGGCAAAAGCTATACTTCTTGAAGTTTGGGATTAGGTCTCAGGGGAATGAGAATGAATGGGACTGGCCAGAAGTATTATCAACAACAGGCAGTCTGATGAAATCAAATGCATCTGTGTTTGATACGCCCAAGACTAATTTGTCTCATATGTTAAGATCATCTGCAGTCATGTCAAGGTCTGGAAAGTCTTCTGACCATGTCATGTTTCCAAAAAATGCTCATATGGACCACGATTTATTTATCGGTGCATTGTCCAGAAAACAAGCGACAACAATACAGGATGATTGCAACAATCCACTCAAAGGTTTTTCTAGTATTTCACAAAACAGCTTGTATGATCAGTTGAAAAACCAGTTAATGGAATCTAATCTGGCTATGTATACAACTGCACCAAACTTTCTTGGAACTCAACTGGAAGATGGTTGTCTGAGTAGATCTCCTTTCTTTGATTCTCTAAAAAGGAAAGGAAATTTGTCAACTGCCCACTCTTCTTTGCAAACTCCAACGAGGCATTTGAAAGACCATGATTGCATAAAAAAGAAGAATGCAAATGATGGTCTTGTAGGAAGGGATGCAGCTTCCTCCAATGTTGATCTTAGGCTTGGTCAATCACCTCAGACAGGAAATCCACTTCCATCATTTATAGAACCTCTGCTGTTTAATGCGCTTGCCAGTCCTCCAAAATTGCAACCTCTGAAGCAGATGATTAATAATGCAGACCTCAGCAGGGAGGAGGAATTACAGAATAAATTTAGCTATGCTGCTGGTTCATTCAAAATGGTTGAAGAAATGCCTCAGCTTAAACCCAAGAACTTTATGTCTGCTATGAGTAATGGTTCTGCTGGAGCTAGATCTGAAACCAAAAATGTGGCCAACAGTTTATCATTTTCACCATTTCCACAATTTTATAATCAACCCGGAGGAATGACAAAAGCTAGTGAACATTTGTGGAATGATAGCAGCCCTATCTTGCCCAAGAAACTGTATTGTGATTACAGTCACATAGGAAGGAAATCAAATAATTCTGGCATAAGGGTAAATAAATATTTGAACAATGATAAAGGGGTGAACTTCAATAAAGACTCTGGTGCCAAAATAAATTCTGGATTTGGAATTGGTCAGTTAATGGAATATCCAAGCTCCATCACAAGAACTGTTGATGGTAGTGATAACTGTGTTTCAGTTGTTAATGAAAAGATATATGTATCAAATCATGAATCAAGCTTGCCATCAGATACATCTGCAAGTGCAAATATTTTCTGTGGTTCAAACAATGTATCTTCTATTGTACAAGAAAATCATGTGATTCCGCAGACACCCATTCCATTTGAAGGGATTTGGAAAGGCCTTCCATATCATGTTTCAAGTTCTGTTTCAAATCAGCCTCCTACTTTGCCACAGCTGCAGGGTTTTAATATGGATGCTTATTTGCATGATGAAAACATGAGGTTGCTTGCATTGACACAGATACTGGAGTTATCTAAACAACAGCATGCATCGAACTTTAATGATATTAATCAGAAGCATGGGAGATCCAATAGCATTTCAAAAGTTCAGAATAGTATATGTGAGGCTTCAACATCTGGACAAGGTACTTCTGGTGCAACATTGAAATTGCCTCAAAATAGAGGGATTTGTGGGAATCATGAGAGTACTATTGGTATGAACAGATATTGTCATTTGTCTGGCCTGTCTCCAATACAGTTGCATTCTAAAGAAAAGGAATCACAATGTAAACATTCATATGTTCTTCCAAATGAAGAAACTTCTTTAAGTGACATAGCTGCCATGGCAGAATTGCCTGATGGATTTTGTGCCATGTCCATTGGCAATTTGGGAAGGGAGGCCTGCTTCCTTGGAATAAACAAAGACAATCCCAGATCAATTGCATGTGAAAAATGTTCCGAGCAACCATCAAATATATGTTTCGGAGGCAAGTACACTTGTGCAGCTTGGGTAAACTGTTGCAGAAGCAATTTTTTCTCAGGAATTGAACCCCTTTGTTATAACATAAAGCAACAACTTGCTAATGCTTGTGGTGAAACATCTTTGAAGATGTCTTCAGATATGAGTAGAGATCTAAATACTTTGCTGGAGAAAAATATCGATTTTGAGCAAGGTGGGCACTTAGATGGTCAAGACTTGATGAAAATTGGCTTTCATGCACCTCAATGGAGAGATGTGCCAAGTAAGGTCAGGGAAGCTGTTTATGATGCAACATCTTCAGATCAAACAGGTACAGGCTTGGATTGGGAAGGACGAGATGGTGTTCAAATTGGAAACATTTCTATGAAACGCCTAAAAAGAACTATTGATGTAGGAACGGGAGATATGTCAAAAGAGCAAGAAAATTCTAATGTTTCTTCTGGATGCTCTGCTCCTGTGGTTACTCAGGTGTCTGTGGAGGTAAACAAAATTGATTCCTGTACCAATAATGATGTAGACACTGGCTTTGTCAACAACAAACTTGTAGTTGATGAAGGGTCAGGTATTGATCAAGGTTGGTCATCAGATTTGGTTGAAAGTGAAAGAAGTGATGAATTTCTAGGCTCAACCTCTGGGAGTTACATGAAAAATGGTTATCGGAGAGTCTTGAATGATCAACCATGTTGCAATCTCCTTGATGACCTTAAACTGTTAGATTCCTTGATATGGAAGGAAGGACAGAATCAAAATCATTTTGTGCTTTCTGCTAATTGTAAAACCAAATCTCAAAAAGTCAAGAAGGGAGGTCTCAAAGGAAAAAAGCGAAAGAGAAATTTGGTGAGGATTCTAGATGCTTCATTATCTTCTAAATTCCCTTCCTTATTGCATAAAAAGAATGATGAAGGTGATGGGACTTTTAATTCCTCTTCTAGTCTGTCAAAAGAAGTGCAAATGCACTCTTTGTGTAGCCTACAAACATCTAGTAACAAACAAAAACAAACTGCATTTTCATCCAAATTTCTTTCTTGTAAGAATCGTCTGAACAATCATCACATTTACAATGTTGGATATGAGTCAGAATCAGATTCTGATGCTGAGCTTCACACATTGCCTGGAGTTTCTGTAACAAAGAAATTAAAAAAGGATCCGATTTCTGATTGTTTTGAGCAGTTTCAAATGCAAGATCCTGCTGATGAGGAACCTAAAAATGCTAAGTTGATGCCATTCTCTTGCAGGAAGGAAAATTCTCATAGAATCACAAGGCCAGTAGTATGTGGAAAATATGGTCAAATATCTAATGTGCATTTGGCTAGAGGGGTGCAAAAACCAGCAAAAATTGTCGCTCTCAGCAAGGTTCTTAAATCTTCCAAAAGATGTATGGGCCATACAAATGGAAAGCATAGGCTAACTTCAAAAAAGAAATGGAAGAGATTGAGCATTGGAACAAGTAGTTTGCACTGCTGTAGTAACCCTGGTTTAAAAATTAAGAAACACAATGAAGCCAACAATACAATAATTTTTAACGAAACAAGTGTTGATGTGTCTATGGAAGATTTGGAGCGTGGTGGCAAGCCACCCGTTGTTTACAAAAGGAAGAAATACGTGAAAGCTAAGCAGGGTGATACTGTTGGAAAAACAGCTTATGTTCCATTGAAGGTGAAGAACAAGGAAATTCAGAAACAGCGTAGCATTAATGAACTCACTGCTAGAGAAACCCCAAAGACGGATATGAAGAATTTTGCTCGAGACAAGGAGTCTGGTTTGTGTAGCACAAAAAGTCGAAACTCTATTCAAGGTCACACGAGCATATCAACCATAAATATAGATGCTTTCTGCTGTGTGTGTCGAAGCTCTAGTAATGATAAAATCAACTGTTTGTTGGAGTGTTGTCGATGTCTGATTAGAGTGCATCAAGCTTGCTATGGTGTTTCCATGTTACCCAAAAAAAGCAGTTGGTGTTGCAGGCCATGCCGAACAAACTCAAAAGATATTGCTTGTGTCCTATGCGGTTATGGAGGTGGAGCCATGACTCGAGCAATAATGAGTCACATGGTGGTCAAGAGCTTCCTAAAAGTGTGGAAAGATGGCATGCCTAAGCATACAACTTCATGTGAAGTTTTTGTAAAGGAAATAAATACATTTCCATCCTCAAAATCTGGACTAGAAGTTGATGAAGAAAGTGTTTTGAAGCCAACAGATCTGATGAAAGTTCAAATATCTACAAATCACATAGAGCAAACCCCAGCCTCAGTTTCTAATTTCAAGATACATAACAGCATTACAGCAGGAGTTCTTGATCCAACTGTTAAACAATGGATTCATATGGTTTGTGGTCTTTGGACTCCTGGAACAAGATGTCCCAATGTTGACACCATGAGTGCTTTTGATGTATCTGGAGTTTCACGTCCAAGAGCAGATGAGGTTTGTTACATTTGCAATCGATGGGGTGGTTCTTGTATAGAGTGCAGGATTGCCGATTGCTCTGTCAAGTTTCATCCTTGGTGTGCTCATCAAAAGAACCTGTTGCAAAGTGAGACTGAAGGTATTGATGATGAGAAGATTGGATTTTATGGAAGATGCATGCTTCATACTATTGAACCTAGTCTGTCCATAAATGATCCTATTGATGAAATGGGCTGTCAAGAAGAAAAGGAATTCACCTGTGCCAGGGTAGAGGGTTACAATGGGCGGAGGTGGGATGGTTTTCAGAATAATCAATTCCAAGGTGGATGCCTTGTTCCCGAGGAGCAGCTAAATGCCTGGATTCACATTAATGGGCAGAAATTATGTTCACAGGGACTCCCAAAATTCCCAGATTTAGATATTGAGCATGATTGCAGAAAGGAATATGCTCGGTACAAACAAGCAAAGGGATGGAAACACCTTGTTGTATACAAGTCGCGAATACATGCCCTTGGTCTTTACACTTCACGATTCATTTCCCGGGGTGAAATGGTTGTTGAGTATATTGGGGAAATTGTGGGGCTGCGTGTGGCTGATAAAAGAGAAAGGGAATATCAATCTGGAAGGAAGCTTCAGTACAAGAGTGCCTGCTATTTCTTCAGGATAGACAAAGAACATATTATTGACGCCACAAGGAAAGGGGGAATCGCCCGATTTGTTAACCACTCATGCCTGCCAAACTGCGTGGCAAAAGTGATTACCGTAAGGCATGAGAAGAAGGTTATCTTCTTGGCAGAAAGGGACATATTTCCTGGTGAAGAGATTACATATGATTACCACTTTAACCACGAAGATGAAGGGAAGATTCCATTTAGTACCTAG | 6305 | 0.4016 | MQSAWQRKCDSPFQQPSTSAAVPSAPSPEQDMNASYGLPQVAHALRSKFVGGNHGLVNPSFPHSTTHGPCQSDTGNSLQSLLYDPPSSLQYNFQDLFDRKLCISSGDCTAAIGNSVVSSIESGTFPTSSVGLVTESLINCNLQNWATTFPEISSSAIVGLNNISNFVFHDTQSSNTATKPTVASGDKARESEGHRQGANTACSLNVCCSDIQTTPNIALEQSSSKYTTPSMSGFPRVFCMGKSGHLLLSNTGLLGIVCSCHCWHMSVLKFCEHCGLHGVDPGDAVYMESGETISQWQKLYFLKFGIRSQGNENEWDWPEVLSTTGSLMKSNASVFDTPKTNLSHMLRSSAVMSRSGKSSDHVMFPKNAHMDHDLFIGALSRKQATTIQDDCNNPLKGFSSISQNSLYDQLKNQLMESNLAMYTTAPNFLGTQLEDGCLSRSPFFDSLKRKGNLSTAHSSLQTPTRHLKDHDCIKKKNANDGLVGRDAASSNVDLRLGQSPQTGNPLPSFIEPLLFNALASPPKLQPLKQMINNADLSREEELQNKFSYAAGSFKMVEEMPQLKPKNFMSAMSNGSAGARSETKNVANSLSFSPFPQFYNQPGGMTKASEHLWNDSSPILPKKLYCDYSHIGRKSNNSGIRVNKYLNNDKGVNFNKDSGAKINSGFGIGQLMEYPSSITRTVDGSDNCVSVVNEKIYVSNHESSLPSDTSASANIFCGSNNVSSIVQENHVIPQTPIPFEGIWKGLPYHVSSSVSNQPPTLPQLQGFNMDAYLHDENMRLLALTQILELSKQQHASNFNDINQKHGRSNSISKVQNSICEASTSGQGTSGATLKLPQNRGICGNHESTIGMNRYCHLSGLSPIQLHSKEKESQCKHSYVLPNEETSLSDIAAMAELPDGFCAMSIGNLGREACFLGINKDNPRSIACEKCSEQPSNICFGGKYTCAAWVNCCRSNFFSGIEPLCYNIKQQLANACGETSLKMSSDMSRDLNTLLEKNIDFEQGGHLDGQDLMKIGFHAPQWRDVPSKVREAVYDATSSDQTGTGLDWEGRDGVQIGNISMKRLKRTIDVGTGDMSKEQENSNVSSGCSAPVVTQVSVEVNKIDSCTNNDVDTGFVNNKLVVDEGSGIDQGWSSDLVESERSDEFLGSTSGSYMKNGYRRVLNDQPCCNLLDDLKLLDSLIWKEGQNQNHFVLSANCKTKSQKVKKGGLKGKKRKRNLVRILDASLSSKFPSLLHKKNDEGDGTFNSSSSLSKEVQMHSLCSLQTSSNKQKQTAFSSKFLSCKNRLNNHHIYNVGYESESDSDAELHTLPGVSVTKKLKKDPISDCFEQFQMQDPADEEPKNAKLMPFSCRKENSHRITRPVVCGKYGQISNVHLARGVQKPAKIVALSKVLKSSKRCMGHTNGKHRLTSKKKWKRLSIGTSSLHCCSNPGLKIKKHNEANNTIIFNETSVDVSMEDLERGGKPPVVYKRKKYVKAKQGDTVGKTAYVPLKVKNKEIQKQRSINELTARETPKTDMKNFARDKESGLCSTKSRNSIQGHTSISTINIDAFCCVCRSSSNDKINCLLECCRCLIRVHQACYGVSMLPKKSSWCCRPCRTNSKDIACVLCGYGGGAMTRAIMSHMVVKSFLKVWKDGMPKHTTSCEVFVKEINTFPSSKSGLEVDEESVLKPTDLMKVQISTNHIEQTPASVSNFKIHNSITAGVLDPTVKQWIHMVCGLWTPGTRCPNVDTMSAFDVSGVSRPRADEVCYICNRWGGSCIECRIADCSVKFHPWCAHQKNLLQSETEGIDDEKIGFYGRCMLHTIEPSLSINDPIDEMGCQEEKEFTCARVEGYNGRRWDGFQNNQFQGGCLVPEEQLNAWIHINGQKLCSQGLPKFPDLDIEHDCRKEYARYKQAKGWKHLVVYKSRIHALGLYTSRFISRGEMVVEYIGEIVGLRVADKREREYQSGRKLQYKSACYFFRIDKEHIIDATRKGGIARFVNHSCLPNCVAKVITVRHEKKVIFLAERDIFPGEEITYDYHFNHEDEGKIPFST | 2031 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste8g00065 | 2031 | SMART | set_7 | 1897 | 2024 | IPR001214 | GO:0005515 | |
| Pste8g00065 | 2031 | Pfam | Tify domain binding domain | 253 | 299 | IPR032308 | - | |
| Pste8g00065 | 2031 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 1687 | 1801 | IPR034732 | - | |
| Pste8g00065 | 2031 | MobiDBLite | consensus disorder prediction | 174 | 195 | - | - | |
| Pste8g00065 | 2031 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1535 | 1608 | IPR013083 | - | |
| Pste8g00065 | 2031 | SMART | PHD_3 | 1548 | 1595 | IPR001965 | - | |
| Pste8g00065 | 2031 | SMART | PHD_3 | 1745 | 1801 | IPR001965 | - | |
| Pste8g00065 | 2031 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
| Pste8g00065 | 2031 | Pfam | PHD-finger | 1561 | 1595 | - | - | |
| Pste8g00065 | 2031 | ProSiteProfiles | SET domain profile. | 1897 | 2018 | IPR001214 | GO:0005515 | |
| Pste8g00065 | 2031 | SUPERFAMILY | FYVE/PHD zinc finger | 1545 | 1599 | IPR011011 | - | |
| Pste8g00065 | 2031 | CDD | ePHD | 1708 | 1791 | - | - | |
| Pste8g00065 | 2031 | Pfam | SET domain | 1910 | 2017 | IPR001214 | GO:0005515 | |
| Pste8g00065 | 2031 | Pfam | PHD-zinc-finger like domain | 1706 | 1781 | - | - | |
| Pste8g00065 | 2031 | Gene3D | SET domain | 1853 | 2024 | IPR046341 | - | |
| Pste8g00065 | 2031 | CDD | SET_SETD1-like | 1899 | 2028 | - | - | |
| Pste8g00065 | 2031 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1686 | 1801 | IPR013083 | - | |
| Pste8g00065 | 2031 | SUPERFAMILY | SET domain | 1885 | 2022 | IPR046341 | - | |
| Pste8g00065 | 2031 | ProSiteProfiles | Zinc finger PHD-type profile. | 1546 | 1597 | IPR019787 | - | |
| Pste8g00065 | 2031 | PANTHER | HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER | 917 | 2028 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste8g00065 | Pste-Chr8 | 382679 | 398431 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste8g00065 | 1899 | 2017 | C2H2 Transcription Factor Family | AT2G23740 | 34.559 | 6.71e-13 | 72.8 |
Transcription factors information