Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00051 ATGGGGAAGCCGACGGGGAAAAAGAAAGAAGTGGAGCGCGGTCACCAGAGCGGGAAAACATGGGAGGAGAAACGTGCGGCGTCGTCGAAGGCGTTGGACGAGGATACGGCGATGTTCATAAGCATGTCGCATGAGGTTCGCGAGGAAGGGAACAGGCTGTTCCAGAAGAGGGACCACGAAGGTGCGATGTTGAAGTACGAAAAGGCCCTTAAGCTGTTGCCGAAGAACCACATCGACATGGCGCACCTTCACACGAACATGGCGATGTGTTACATGCAGCTGGGGCTCGGCGAGTACCCACGCGCCATCAGCGAGTGCAACGCCGCGCTGACGGTGTCGCCGCGCTACACGAAGGCGCTCCTCAAGAGGGCCAAGTGCTACGAGGCGCTTAACCGCGTGGATTTGGCCATGCGTGATGTGCGCGTGGTGCTTAACTTGGAGCCTAATAATTCGACGGCTTTGGAGGTTTTGGATAGTTTGAGGGTCACGATGGATGAGAAAGGGATCGTTTTGGATGAGACGGAGATCGCCCTCGCCGCGCTGCAGCAGCACCCGGAGCCGGCGGCGGCGCGGCTGAGGAAGGTGGTGAGGGAGAAGATTAAGAAGAAGAAGGAGCATAAGGTGGAGGATGAAGGGAAAGCCAAGAGTGTGATTGTTGAGGAGATGGTCAAGGTTGAGAATTTTCACAAGGAAAAGGAGAAGAAGAAGGAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAAAAAGGGGTTGTTACTAGGAGTGTGAAGTTGATATATGGAGATGATATTAGGTGGGCACAATTGCCTTTCAATTGTGGAATGAGGTTGGTGAGGGATGTGGTGAGAGATAGGTATCCTGGGTTGAAGGGTGTTCTTGTGAAGTATAGGGATAGGGAGGGTGATTTGGTTACTATTACTAGTACTGCTGAATTGAGGTTGGCTGAGACATGTCATGTTCTTGGGTCGATTAGGCTTTATGTTACGGAGGTTGAGCCGGATCAGGAGTTGTGTTATGATGATGGGGTGGAGGATGGTGGGAGGGGGAAGGTGGATGAAGGGAGGGGTGTGAGGAAAGGGGTGAGTACTGTGGAGGATTGGCTTGTGCAGTTTGCTAGGTTGTTTAAGAATCATGTTGGGTTTGATTCTGATGCTTATTTGGATATTCATGGGATTGGGATGAAGCTGTATTCTGAGGCCATGGAGGATGCTGTGACGAGTGAGGCTGCTCAGGAGCTGTTTGACATTGCAGCAGATAGGTTTCAGGAGATGGCGGCTATGGCGTTGTTTAATTGGGGGAGTGTGCATATGGCGAAGGCGAGGAAGAGGGTGATTATTCCGGAGGATGGTTTGAGGGAGTTGTCGTTCGAGTGTGTTAAGGCTGCGGTTGAGTGGGCTCAGAGGGAGTACAAGAATGCAGAGAGGAGATTTGAAGAGGCTGTGAAGATCAAACATGATTTTTATGAAGGGCTTCTTGCTCTTGGGCATCAGCAGTTTGAGCAAGCAAGGCTCTGCTGGTCTTATTTGGTTGCAACCAATAAGGATTTGGAAGCTGGCCCTTCGGATGAGGTGCTGCAGCTGTATAACAAGGCTGAGGACTGTATGGAGAAAGGCATGTTGATGTGGGAGGCGATTGAGGAGCGGCGTTTGAATGGATTGTCCAAAGCGGATAAATATAAAGAGCAGTTGGAGAAAATGGGGTTGCATGGTCTTTTCAGGGATGTTTCTGCTGATGAAGCTGATGATCAAGCTGCAAGGATGAGGTTGCAAATATATCTTTTATGGGGGACCTTGTTGTATGAGCGTTCTGTTGTGGAGTATAAGCTAGGCCTGCCAACATGGGAGGAATGTTTGGAGGTGGCAGTAGAAAAATTTGAACTGGCTGGAGCTTCTACAACTGACATTGGTGTCATGATAAAGAACCATTGTTCTAATGAAACAGCAATGGAAGGGTTCAAAATTGATGAGATAGTGCAAGCATGGAATGAGATGTATGATGGGTGGCAATTTGATGTTCCATCATTTCGACTTGAGCCATTGTTTCGTCGGCGTGTTCCAAAATTCCATTACGTCCTCGAGCATTTTTGAGTTTTCTTCTTGTGTTTGTTATTCTTTATAGAGGCAATATTAATGCTTCTATTTTCTCTATAAGTTTTTGAGGTCTTCTTCATTCCATTCCAAGATAGGTATTCTTTCTCCATACTGTTAACTTATTGATTGGTGCTACGATTGGATTATTCTTTTACATTGCAGTTTTGTATGAGGTTGAGATCTTAGGCTAGAAAGAAAGCCTAGTTATGTGATTTGGTTTTCTTTGAGGGGATGGGTCAAGAGTGCGTCATTCTTTACAGTTTTGGTGTCAGTATATGATTCCTTTTGTTGGTTTGAGGCAGTAAGTGTTTGATTTGATTGGTTGCAAAAGCAATAAGGAAAAAAAAAATTCCTAAAGGTTGTTTGGTGGGGTTTGATCTTTGTTGATTATCTTGGTTGTCAAATGTCATTTGTAACATTATACGAGTGTTGTATAGTATTATGCATTTTTTTATCACAAATTCTCTTGAGTACTTATATCTTAAGTTGTTAACCCACTTCATGTACGAATACTTAGTTAGCTAGAGAAACTGGCTAGCGGGCATCACATCCCAAATCCCACGTTCTCATGTTGTACATAATTTCTTTTGTTTTCTTGCATATTTAAGTTGAACAAAAATGATAAAC 2718 0.4562 MGKPTGKKKEVERGHQSGKTWEEKRAASSKALDEDTAMFISMSHEVREEGNRLFQKRDHEGAMLKYEKALKLLPKNHIDMAHLHTNMAMCYMQLGLGEYPRAISECNAALTVSPRYTKALLKRAKCYEALNRVDLAMRDVRVVLNLEPNNSTALEVLDSLRVTMDEKGIVLDETEIALAALQQHPEPAAARLRKVVREKIKKKKEHKVEDEGKAKSVIVEEMVKVENFHKEKEKKKEEKEKEKEKEKEKGVVTRSVKLIYGDDIRWAQLPFNCGMRLVRDVVRDRYPGLKGVLVKYRDREGDLVTITSTAELRLAETCHVLGSIRLYVTEVEPDQELCYDDGVEDGGRGKVDEGRGVRKGVSTVEDWLVQFARLFKNHVGFDSDAYLDIHGIGMKLYSEAMEDAVTSEAAQELFDIAADRFQEMAAMALFNWGSVHMAKARKRVIIPEDGLRELSFECVKAAVEWAQREYKNAERRFEEAVKIKHDFYEGLLALGHQQFEQARLCWSYLVATNKDLEAGPSDEVLQLYNKAEDCMEKGMLMWEAIEERRLNGLSKADKYKEQLEKMGLHGLFRDVSADEADDQAARMRLQIYLLWGTLLYERSVVEYKLGLPTWEECLEVAVEKFELAGASTTDIGVMIKNHCSNETAMEGFKIDEIVQAWNEMYDGWQFDVPSFRLEPLFRRRVPKFHYVLEHF 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00051 695 Gene3D Tetratricopeptide repeat domain 32 168 IPR011990 GO:0005515
Pste8g00051 695 PANTHER PROTEIN CLMP1 1 694 IPR044517 -
Pste8g00051 695 SMART PB1_new 253 331 IPR000270 GO:0005515
Pste8g00051 695 SUPERFAMILY TPR-like 45 160 IPR011990 GO:0005515
Pste8g00051 695 CDD PB1 256 328 - -
Pste8g00051 695 SMART tpr_5 43 76 IPR019734 GO:0005515
Pste8g00051 695 SMART tpr_5 454 487 IPR019734 GO:0005515
Pste8g00051 695 SMART tpr_5 117 150 IPR019734 GO:0005515
Pste8g00051 695 SMART tpr_5 81 116 IPR019734 GO:0005515
Pste8g00051 695 MobiDBLite consensus disorder prediction 1 29 - -
Pste8g00051 695 Coils Coil 222 249 - -
Pste8g00051 695 ProSiteProfiles TPR repeat profile. 117 150 IPR019734 GO:0005515
Pste8g00051 695 SUPERFAMILY CAD & PB1 domains 253 337 - -
Pste8g00051 695 Gene3D - 254 331 - -
Pste8g00051 695 Pfam PB1 domain 253 329 IPR000270 GO:0005515
Pste8g00051 695 Coils Coil 456 483 - -
Pste8g00051 695 ProSiteProfiles TPR repeat profile. 43 76 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00051 Pste-Chr8 282161 286498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00051 33 150 Calmodulin-binding Proteins AT3G25230 29.921 2.11e-08 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00051 8 282161 286498 Pste2g01672 2 17443025 17447043 PCT