Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00041 CTTTTGTTCAACGGTGCCATAACAGTGGTTGAAATTGTAAAACGATTTCACACCGCAACAGGGAGGACGGCACGGGGCATCTGTCGAACAATTTAATTAGAATGGTCGTATTTTTTTTTAATCTATAAGTTGGTATGATTTGACCAAATCGTGTCTCTCTCACCGAGCCACGAAAGTTGACTCGAAGAAAGGAAAGACTTGGGAGTAAGGCTGGCAGCAATTACGCGCGAAGGCCATTGCAAAGCTAAATTCAATTATTGAACCTGAAGAAAGAAAAGAAATAAAAAAATAAAAAAAAGGGAAGACAGAAGGGAGAGGCAGGTGTTGAAGAAGAAAAATAATAAAGGTTTGATCCATCAGAGGAGCCACAAAAAAAATTGTTGTTTCTGCTGCAGGTTGAAGACAAAGTGGTAGGCTTCAATGGGAAATTGCTGGGGTTTTCCACCTCACAACTCAACCCCCACCCCAACAATAACCGGTAACCTCAGTACAGCTACTCCGGGGACATCTCAGAGCATCGGCAGCAGCAGCAGCTATACTACTACTACTACTACTATTACAAGTACTTCTACTGGAAGTGGAAACAGCTCCATAAATAGCAAGTTCTCCGTGTCAAGCGGCGGTGATCAACCTTATCCAAATGGACAGATCTTACCCACCTCTAATTTGAGGATCTTCACTTTTGCGGAGTTGAAGGGTGCAACTAGGAATTTCAGAGCTGATACAGTGCTTGGGGAAGGGGGTTTTGGAAAAGTCTTCAAGGGTTGGCTTGAAGAGAAGGCCACGTCCAAGAGTGGAAGCGGAACAGTCATTGCTGTCAAAAAACTCAACTCCGAAAGCTTACAAGGTATTGAGGAGTGGCAGTCGGAGGTCAATTTTCTTGGACGCCTTTCTCATCCTAATCTTGTTAAGCTGTTGGGATACTGTTTGGAGGAAACAGAGCTTCTTCTCGTCTATGAATTCATGCAAAAGGGCAGTTTGGAAAACCATCTATTTGGAAGAGGTTCTGCTGTTCAACCACTTCCGTGGGACATCAGGCTTAAGATCGCAATTGGAGCTGCTCGTGGCCTTGCATTCTTGCATACATCTGAGAAAGTAATTTATAGAGACTTCAAGGCCTCCAACATATTGCTTGATGGGTCATATAATGCAAAGATATCAGACTTTGGCTTGGCAAAACTAGGTCCTTCAGCTAGTCAATCCCATGTGACAACAAGGGTGATGGGTACATATGGCTATGCAGCTCCTGAATATGTGGCCACAGGTAATGTAGTATATCTGTTAAAACTCTTGGGTAAGTTTAGAATTATAAGCTATGTTAAATACAAAATAAGCCAACTCAAACGTCGATCTAATTATCGTGATCTTGAAATGTTGTTGGTTTACTACACAGGGCATCTTTATGTAAAGAGTGACGTATATGGGTTTGGAGTTGTTCTAGTTGAAATACTAACAGGCCTGCGAGCACTTGATACCAACCGTCCAAGTGGGCAACATAGTCTAACAGAATGGGTGAAGCCATACCTGCATGACAGAAGAAAGTTGAAGGGCATTATGGATTCTCGATTGGAAGGAAAGTTTCCTTCGAAAGCTGCATTTCGTATAGCTCATCTTGCATTGAAATGTCTGGCAGCTGAGCCCAAACAGCGGCCATCAATGAAGGAAGTCTTGGAGAATTTGGAGCGAATACAAGCTGCCAACGAGAAACCTGTGGAACCTAAACACCGCTCTACTCATACCCGTCAAGGTCACCAGGCTGTGCACCATCGATCTCCACTTCAGGAC 1785 0.4347 MGNCWGFPPHNSTPTPTITGNLSTATPGTSQSIGSSSSYTTTTTTITSTSTGSGNSSINSKFSVSSGGDQPYPNGQILPTSNLRIFTFAELKGATRNFRADTVLGEGGFGKVFKGWLEEKATSKSGSGTVIAVKKLNSESLQGIEEWQSEVNFLGRLSHPNLVKLLGYCLEETELLLVYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGNVVYLLKLLGKFRIISYVKYKISQLKRRSNYRDLEMLLVYYTGHLYVKSDVYGFGVVLVEILTGLRALDTNRPSGQHSLTEWVKPYLHDRRKLKGIMDSRLEGKFPSKAAFRIAHLALKCLAAEPKQRPSMKEVLENLERIQAANEKPVEPKHRSTHTRQGHQAVHHRSPLQD 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00041 455 ProSitePatterns Protein kinases ATP-binding region signature. 104 135 IPR017441 GO:0005524
Pste8g00041 455 MobiDBLite consensus disorder prediction 421 455 - -
Pste8g00041 455 CDD STKc_IRAK 104 423 - -
Pste8g00041 455 FunFam Serine/threonine-protein kinase BIK1 65 181 - -
Pste8g00041 455 PANTHER OS01G0588500 PROTEIN-RELATED 47 424 - -
Pste8g00041 455 Pfam Protein kinase domain 100 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00041 455 SUPERFAMILY Protein kinase-like (PK-like) 81 440 IPR011009 -
Pste8g00041 455 Gene3D Transferase(Phosphotransferase) domain 1 182 446 - -
Pste8g00041 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Pste8g00041 455 ProSiteProfiles Protein kinase domain profile. 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g00041 455 MobiDBLite consensus disorder prediction 1 74 - -
Pste8g00041 455 Gene3D Phosphorylase Kinase; domain 1 82 181 - -
Pste8g00041 455 FunFam Os07g0541700 protein 182 270 - -
Pste8g00041 455 Pfam Protein tyrosine and serine/threonine kinase 325 420 IPR001245 GO:0004672|GO:0006468
Pste8g00041 455 MobiDBLite consensus disorder prediction 421 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00041 Pste-Chr8 214903 217919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00041 65 428 Receptor kinase-like Gene Family AT4G02010 43.207 1.70e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste8g00041 Pkinase 8.7e-35 CL0016