Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00019 GAAGTTTTCTGACTGTATTGTATAATTTTAGAGTTAGAGTTAGCGTTGGCACTAGCATATTCTTCTGGACGCGCGCGGCGGAGGTCTTGTCTCTTCTTACTGTCACTCGACTCAACGGTCAGTTGTTTTCCATATCTTGTGTGTATGAATTCCATATCCTGATAGTAATAGTTTCTCGCATATTTACGATGGATAACGAGGTGTTAGAATTTGATATTGGGCTGGGAGGAGGCGAGGGAGAATATGAGGAAGATGGAGGGGATATTGAACACCCAATTGATGAGGAGGAATTGGGTGATAGTAGTGGTGTAGCCGCTGGAAGTGGGGCTGGTGAAATATATCTTCCCGAGGGAGACCTCTTAGATCTTGAACCTTGCGAGGGCATGGAATTCGAGTCGGAAGAGGCTGCCAAGGCCTTCTACAATTCCTACGCCCGTCGTGTTGGGTTCAGTACTCGTGTCAGCTCATCCCGTCGTTCCAGGCGAGATGGAGCTATTATACAGAGGCAATTTGTTTGCGCAAAGGAGGGTTTCCGCAACTTGAATGAGAAACGCACCAAGGATAGAGAGATCAAGCGCCCACGAACAATTACCAGAGTCGGATGTAAAGCCTCTTTGTCTGTCAAAATGCAAGACTCTGGCAAGTGGATCGTGTCTGGCTTTGTTAGAGAACATAATCACGAACTGGTTCCACCGGACCAGGTGCACTGTCTTCGCTCTCACCGGCAAATATCAGGAGCTGCCAAGACTCTCATCGATACTTTACAGGCTGCCGGGATGGGTCCTCGTAGAATTATGTCCGCACTAATTAAAGAGTATGGTGGGATTAGCAAAGTCGGCTTTACAGAGGTGGACTGTAGGAATTACATGAGGAATAATAGGCAGAGAAGTTTAGAAGGGGACATTCAACTTGTTCTTGATTATTTGAGACAAATGCATGCCGAAAATCCTAATTTCTTCTATGCTGTGCAAGGGGATGAGGATAACTCCGTCAACAATGTTTTCTGGGCTGATCCCAAGGCAAGGACAAATTATACATTTTTTGGTGATACTGTGACTTTTGACACTACATACCGATCTAATAGGTATCGGTTACCATTTGCTCCCTTTACAGGTGTAAACCATCATGGGCAACCTGTTCTCTTTGGCTGTGCTTTCCTAATTAACGAATCTGAAGCATCATTTGTGTGGCTTTTTAAGACATGGCTTTCGGCCATGTCAGGACGTCCACCAGTTTCAATAACAACTGATCATGATTCTGTAATTCGGTCTGCCATAATACAAGTCTTTCCTGAGACCCGGCACCGTTTCTGCAAGTGGCACATCTTTAAAAAATGCCAGGAGAAGTTATCTCATATTTTCCTCCAATATCCAAATTTTGAAGCTGAATTTCACAAATGTGTTAACTTAACTGATTCGATTGAGGAATTTGAGTCTTGCTGGTCAGCACTTGTAGATAAATATGATCTCAGGGACCACGAATGGCTTCAAGCAATACATTCTGCCTGTAGGCAGTGGGTACCTGTATATTTACGAGACACATTCTTCGCAGAAATGTCCATCACTCAGCGAAGTGATAGCATGAACTCTTACTTTGATGGGTATATAAATGCTTCAACCAATTTAAATCAGTTCTTTAAGCTGTATGAGAAAGCACTTGAAAGTCGCAATGAGAAAGAAGTGAAAGCAGATTATGACACAATGAATACTTTGCCAGTATTGAGGACCCCATCTCCAATGGAGAAGCAAGCATCTGAGCTTTACACGAGAAAAATTTTCATGAGGTTCCAGGAGGAGTTAGTCGGGACATTAACATTCATGGCATCCAAAGCTGATGATGATGGGGAGGTCATTACATATCAGGTAGCCAAATTTGGAGAGGACCATAAAGGGTATTGTGTTAAATTCAATGTTATGGAGATGAAAGCGACTTGTAGTTGCCAAATGTTTGAGTTTTCAGGCCTTCTTTGTAGACATGTTTTGGCAGTCTTTAGAGTCTCCAATGTGCTTACCCTCCCATCTCATTATATATTGAAGCGTTGGACAAGAAAGGCCAAAAGTAATGTAATATTAGAAGAACACTCTTGTGATGTATATACTTATTATTTGGAATCTCATACAGTTAGATATAACACCCTCCGACATGAGGCCTTTAAATTTGTAGATGAAGGCGCACAGTCTACTGAAACTTATGATGTTGCAATGGATGCTTTACAAGAAGCTGCAAAAAGAGTTGCCCAGGCAATGCAAAACGAGGGAAGAATTCCTATCAGTAATGGAAAGGTAAGGAAACACGTGCTGCATGATGAAAGTCATGCTAATTACACAAGTGGTTGCCAGGAAGAAAGTTTGAGCCAACATATGTCTAAGGATGATTTGGATAAGAATATTAGAAAACTTGCGAATGAGCTTGAGTATGCAAATCGGAAGTGTGAAATTTATCGGTCCAACCTGCTTTCGGTTTTGAAAGCTGTTGAAGATCACAAGTTAGAGTTGTCAGTTAAGGTGGAAAACATCAAGATAAGCATGAAGGATGGCGTCTAAAGACTGAATTAACATTGAAGCATATGGCAAAACAAATGAAAAGTATACTCTCCTTCCATTTTCTTTTTGCCAATCCAGTCAAACCTTTATCTTATGATGTATAAAGTTAGTTTGCGGTGTGTCATTGTCAATAAGGTGTTTATTATATTGAAGTCGACTTTTATAGTTCAACATTTTTTAATAATTTAGCACATATATGTCATCATATCAATATTTCCA 2762 0.4117 MDNEVLEFDIGLGGGEGEYEEDGGDIEHPIDEEELGDSSGVAAGSGAGEIYLPEGDLLDLEPCEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQRSLEGDIQLVLDYLRQMHAENPNFFYAVQGDEDNSVNNVFWADPKARTNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFVWLFKTWLSAMSGRPPVSITTDHDSVIRSAIIQVFPETRHRFCKWHIFKKCQEKLSHIFLQYPNFEAEFHKCVNLTDSIEEFESCWSALVDKYDLRDHEWLQAIHSACRQWVPVYLRDTFFAEMSITQRSDSMNSYFDGYINASTNLNQFFKLYEKALESRNEKEVKADYDTMNTLPVLRTPSPMEKQASELYTRKIFMRFQEELVGTLTFMASKADDDGEVITYQVAKFGEDHKGYCVKFNVMEMKATCSCQMFEFSGLLCRHVLAVFRVSNVLTLPSHYILKRWTRKAKSNVILEEHSCDVYTYYLESHTVRYNTLRHEAFKFVDEGAQSTETYDVAMDALQEAAKRVAQAMQNEGRIPISNGKVRKHVLHDESHANYTSGCQEESLSQHMSKDDLDKNIRKLANELEYANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKDGV 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00019 784 Pfam SWIM zinc finger 557 602 IPR007527 GO:0008270
Pste8g00019 784 Coils Coil 668 688 - -
Pste8g00019 784 ProSiteProfiles Zinc finger SWIM-type profile. 569 605 IPR007527 GO:0008270
Pste8g00019 784 Coils Coil 727 754 - -
Pste8g00019 784 SMART 26again6 580 607 IPR006564 GO:0008270
Pste8g00019 784 Pfam FAR1 DNA-binding domain 77 168 IPR004330 -
Pste8g00019 784 Pfam MULE transposase domain 289 382 IPR018289 -
Pste8g00019 784 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 59 684 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00019 Pste-Chr8 60858 69932 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pste8g00019 MULE 1.4e-28 CL0219