Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02459 ATTAGGTTAAGGAAAGGAAAGGAAAGGGCAAAATTAAATCTAAATTGTGTTAGAAGAGGAGCAAGAAGAGAAAGAGATTTGAAGAGGAGCAAGAAGAGAAAGAGATTTGTGATTGTTATTGTTATTTTGATTGATTGCATTTGCAGTCGGAGGAAGAAAAGGAAGGATGAGAGGAAGGAGTTACAGTCCATCGCCTCCGCGTTATAGCAGAAGAGGAGGAGGAAGGAGTCCGAGTCCTAGAGGCCGCTATCCTCCCCGTCCCAGACAGCAAGATCTCCCTACCAGTCTTCTTGTTCGTAACCTTCGCCATGACTGTAGGCCCGAGGATCTTCGCAGACCTTTTGGACAGTTTGGTCCTCTCAAGGACATTTACCTGCCTAAGGATTACTACACTGGAGAACCCCGAGGGTTTGGTTTTGTTCAATACGTCGATCCTGCTGATGCTGCTGATGCTAAATATCATATGGATGGTCAAATTCTTCTTGGTCGGGAGCTCACTGTTGTCTTTGCGGAGGAGAACAGAAAGAAGCCAACTGAGATGAGGTCAAGAGAGAGAAGGGGTCGGTTTTCCGATCGTAGGAGGTCTCCTCCTCGTTATTCTCGTTCACCACACTACTCTCGATCTCCACCACCACGCCATAGATCTCATTCTCGCAGTCGTGATTATTATTCTCCTCCTCCTAAACGAAGGGAGTATTCAAGATCCGTCTCCCCTGAGGATAGAAGGTACAGCCGAGAAAGATCATATTCACAGCATAGTAGAGAGAGGTCATACTCGCGCTCCCCACCTTATAATGGGGGTTCGAGGAGCCGAAGTCAGAGTCCAGCAAAGGGACCAGGTCGGAGCGGAAGTCCAAGTCCTAACCGAGATGTAAGGGAACAAACTCGTGGTAGGTCCCCCAGTCAATGAGAATGGGAAATAATTTGTCCTGGAATTAATTAGATGTGGATTTTGTCTGAATGTGGCAAACTACTTATTCTTGTCTGAACTTAGATACAACGGAGTTTGATTTTGATTTGTGGCTTTATGTCAGATGTTGCTTGAATTAAAACGTTGTAGGTAAGTCTAGCCGTAGTTGGATTTTATTTTGAAATTTTAGTATTTTTCATTTAGCTTTAGTTGGATGTTGATGTAGACTTTGCTAGAATTTTCTATTTGTATGGTTTGGTTTGGCCTAATTACACTTTTTTTAATATGAATAATTACACTCTGCCTTCTCTCTTGTTATCATGACTTGTGTTTCCGATTTTAAAAATTGTGAAATGTGTGTAGTAGTAGTAAATTGGCATTGAGTTGATTGACACGGGTAATAATTTAACAGTAATTTAAAGACTTGACATCTTAGCACATTAATTTTGTGAATTAGAATATAATAGAAATTTTTTGTAATTAATAAATACTACAATGTGTTAATTAATATTATCATTTAACAATGATTTGGCACGTGTTCTTTTTAAAAAATTGAACACAATGATGAAACAG 1483 0.4039 MRGRSYSPSPPRYSRRGGGRSPSPRGRYPPRPRQQDLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPTEMRSRERRGRFSDRRRSPPRYSRSPHYSRSPPPRHRSHSRSRDYYSPPPKRREYSRSVSPEDRRYSRERSYSQHSRERSYSRSPPYNGGSRSRSQSPAKGPGRSGSPSPNRDVREQTRGRSPSQ 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02459 247 SMART rrm1_1 40 113 IPR000504 GO:0003723
Pste7g02459 247 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 117 IPR000504 GO:0003723
Pste7g02459 247 MobiDBLite consensus disorder prediction 1 38 - -
Pste7g02459 247 FunFam - 4 131 - -
Pste7g02459 247 MobiDBLite consensus disorder prediction 200 226 - -
Pste7g02459 247 Gene3D - 31 147 IPR012677 -
Pste7g02459 247 MobiDBLite consensus disorder prediction 119 143 - -
Pste7g02459 247 SUPERFAMILY RNA-binding domain, RBD 38 145 IPR035979 GO:0003676
Pste7g02459 247 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 110 IPR000504 GO:0003723
Pste7g02459 247 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 38 231 - -
Pste7g02459 247 MobiDBLite consensus disorder prediction 160 199 - -
Pste7g02459 247 MobiDBLite consensus disorder prediction 119 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02459 Pste-Chr7 23570901 23573625 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02459 39 170 Eukaryotic Initiation Factors Gene Family AT4G34110 26.515 8.74e-10 56.6