Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02456 AGTAGGGAGGGATTTGGGGCCGGGGCTCCTGATTTAGTGAAGCCCAGGATGAGGATGTCAAGTTCGATCCTTGTGGGCTGGCCTTGTTCTTCAGTATTATTCCTTTGTATATATCCGAAAACGAAAACAAGTTTGGGGTATGGCATAAGCCCGGCGACGGCGACGGGCATTTGTATGGCGAAAGATGTGTGGAGCCGAACATGGGGAAGGCAGCAAGAAGCACCGTACGTGGACCGGAGTGTGAACATGGAAGAGCTATTGGCGGCAATTGGGCAGACAAAGAACGAGGATGAGCTGTATGCGGTTATGTCCCCCTACGAGGGGAGGCAGCTTTCTATGCGGTTCATGGTTTCCCTTCTGTCACGCGAGCCCGATTGGCAACGTGCCCTTGCCCTTCTCGATTGGATCAATGACAAGGCCCTCTATTCCCCCTCCCTCTTCGCCTACAACGTCGTTCTCCGCAACGTCCTCCGTGCCAAGCAATGGCACCTCGCCCACGGCCTGTTCGACGAAATGCGCCAAAAAGGCCTCTCCCCCGATAGTAACTTGATTGAGCTTGCTCGCAAGCTTTCCGATTATTCCAAGGCCATTTCCATCTTCACCAGATTGAAAGCCTCCACTATTTCCCCTGACCTCATTGCCTATAACTCCATGATCAATGTCTTTGGCAAAGCCAAGCTCTTCCGTGAGGCTCGCCTTCTTCTTCAAGAGATGAGGGACAATTCCGTTCCCCCCGACACCGTCAGCTACTCCACTCTTCTTTCCATCTTCGTTCACAACCATAAGTTTGTTGAAGCACTTTCTCTATTCTCTGAAATGAATGAAGCCAAATGCCCCCTTGATCTCACCACTTGTAACATCATGATTGATGTTTACGGCCAGCTTCACATGCCCAAGGAAGCCGACCGCCTCTTCTGGAGCATGAGGAAAATTGGGATTCAACCCAATGTGGTTAGCTATAATACGCTCTTGAGGGTTTATGGTGAGGCTGAGCTCTTCGGGGAAGCCATCCACCTTTTTCGTCTGATGCAAAGTAAGGATGTACAACAGAATGTCGTCACCTACAACACCATGATTAATATCTATGGCAAGACTCTTGAGCATGAGAAAGCTACCAATCTCATTCAACAAATGAAGAAAAACGGAATTGAACCCAATGCCATCACTTATTCAACCATAATTTCTATATGGGAAAAGGCGGGGAAGCTGGACCGTGCTGCCATCTTGTTTCAAAAATTAAGGAGTTCAGGAGTTCCAATTGATGAGGTTCTTTACCAGACAATGATTGTAGCCTATGAGAGGGCAGGTTTAGTTGCTCATGCAAAGCGTCTACTTCATGACCTCAAGCGACCGGACAATGTTCCCAGGGAGACTGCAATCGCCATTCTTGCCAGAGCTGGTCGAATTGAAGAGGCGACCTGGGTTTTCCGGAATGCTTTTGATGCGGGAGAGGTCAAAGATATATCTGTGTTTCGCTGCATGATTAATCTCTTCTCTAAGAACAGAAAATATGCCCATGTAGTTGAAGTGTTCGAGAACATGAGAGAGGTGGGATATTTTCCTGATTCTGATGTTATTGCCCTCGTGCTGAATGCTTTTGGAAAGCTGCGTGAATTTGATAAAGCAGATGCTTTATATAGACACATGCATGAAGAAGGGTGTGTTTTTCCTGACGAAGTTCATTTCCAGATGCTGAGTCTATATGGTGCAAGAAAGGATTTCTTGATGGTAGAGTCGTTGTTTGAGAAACTGGATTCCAATCCTAATATCAACAAGAAGGAGTTGCATCTTGTTGTTGCTAGCATTTATGAGAGAGTAGATAGACTTAATGATGCTTCCCGAATCATGAATAGGATGAATCAAAAAGCAATCAGAAGCAGGGATCATGCTTAG 1893 0.468 SREGFGAGAPDLVKPRMRMSSSILVGWPCSSVLFLCIYPKTKTSLGYGISPATATGICMAKDVWSRTWGRQQEAPYVDRSVNMEELLAAIGQTKNEDELYAVMSPYEGRQLSMRFMVSLLSREPDWQRALALLDWINDKALYSPSLFAYNVVLRNVLRAKQWHLAHGLFDEMRQKGLSPDSNLIELARKLSDYSKAISIFTRLKASTISPDLIAYNSMINVFGKAKLFREARLLLQEMRDNSVPPDTVSYSTLLSIFVHNHKFVEALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKIGIQPNVVSYNTLLRVYGEAELFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQQMKKNGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVPIDEVLYQTMIVAYERAGLVAHAKRLLHDLKRPDNVPRETAIAILARAGRIEEATWVFRNAFDAGEVKDISVFRCMINLFSKNRKYAHVVEVFENMREVGYFPDSDVIALVLNAFGKLREFDKADALYRHMHEEGCVFPDEVHFQMLSLYGARKDFLMVESLFEKLDSNPNINKKELHLVVASIYERVDRLNDASRIMNRMNQKAIRSRDHA 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02456 630 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 145 179 IPR002885 -
Pste7g02456 630 PANTHER MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1 99 275 - -
Pste7g02456 630 Pfam PPR repeat 490 518 IPR002885 -
Pste7g02456 630 Pfam PPR repeat 529 554 IPR002885 -
Pste7g02456 630 Pfam PPR repeat 148 177 IPR002885 -
Pste7g02456 630 Pfam PPR repeat 423 450 IPR002885 -
Pste7g02456 630 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 211 245 IPR002885 -
Pste7g02456 630 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 351 385 IPR002885 -
Pste7g02456 630 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 316 350 IPR002885 -
Pste7g02456 630 Pfam PPR repeat family 210 254 IPR002885 -
Pste7g02456 630 Pfam PPR repeat family 351 394 IPR002885 -
Pste7g02456 630 Pfam PPR repeat family 281 325 IPR002885 -
Pste7g02456 630 Gene3D Tetratricopeptide repeat domain 379 451 IPR011990 GO:0005515
Pste7g02456 630 Gene3D Tetratricopeptide repeat domain 307 378 IPR011990 GO:0005515
Pste7g02456 630 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 487 521 IPR002885 -
Pste7g02456 630 Gene3D Tetratricopeptide repeat domain 92 183 IPR011990 GO:0005515
Pste7g02456 630 Gene3D Tetratricopeptide repeat domain 184 295 IPR011990 GO:0005515
Pste7g02456 630 NCBIfam pentatricopeptide repeat 214 247 IPR002885 -
Pste7g02456 630 NCBIfam pentatricopeptide repeat 248 281 IPR002885 -
Pste7g02456 630 NCBIfam pentatricopeptide repeat 529 558 IPR002885 -
Pste7g02456 630 NCBIfam pentatricopeptide repeat 318 350 IPR002885 -
Pste7g02456 630 NCBIfam pentatricopeptide repeat 284 317 IPR002885 -
Pste7g02456 630 NCBIfam pentatricopeptide repeat 148 181 IPR002885 -
Pste7g02456 630 NCBIfam pentatricopeptide repeat 490 522 IPR002885 -
Pste7g02456 630 NCBIfam pentatricopeptide repeat 353 387 IPR002885 -
Pste7g02456 630 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 246 280 IPR002885 -
Pste7g02456 630 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 386 420 IPR002885 -
Pste7g02456 630 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 522 556 IPR002885 -
Pste7g02456 630 FunFam pentatricopeptide repeat-containing protein At5g39980, chloroplastic 297 454 - -
Pste7g02456 630 Gene3D Tetratricopeptide repeat domain 452 629 IPR011990 GO:0005515
Pste7g02456 630 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 281 315 IPR002885 -
Pste7g02456 630 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 421 455 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02456 148 584 Glycosyltransferase AT1G05670 23.596 6.08e-37 145