Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02435 ATGAAAGGCGTATTTGTTGTCCTTCTAGTCTTTGTAACAGTGTCACGTAGCTTTTTTGGAAGAGCATCTCCTTCTCCTTGCTTCAATGTGGCTAGCTACGGTGCCAGGGGGAATGGCAAAACTGATGATTCAGAGGCTTTCCTGAAAGCATGGAAAGACGTGTGCAATGCAACTCAGGAGACTGCAACACTTGTCATACCCAAACTCAAAACATTCATGTTGCAACCTATTTTGTTTCAGGGTCCTTGCAAACCCTCAACCATTAACATTGAGCTACAGGGGAGTATGATTGCCCCCAAATCCGTTAACTCTTGGAAATGGAGAAACAGCGATAGGAAATGGGTTCAGTTCTCCAACATAAATGGTCTTGTAATTAACGGAGAAGGACAAATTGATGGGCAAGGTCATCCATGGTGGAATTCCAATGTCTCTAATAGGCCCCCCTATAATGTAACTGGTTCCCTACATGTGAAGGTTCTTCAATTCCATAGCTGTGGAAATCTAAGTCTTAATGGGACGACTCACATCAACAGTCCCAAAAATCATATAAGCATAGATATGTGTAACGGGGTACACATATCAAACATTCACATTATTGCACCAATGCATAGTCCCAACACTGACGGGATAGATATTGCAGGATCATCCAACGTCTTAATAAAAAATTCCACTATTGAAACTGGTGATGACTGCATTGCCATTAACAGCGGTTCTTCCTTGATCAATATAAGTGGTATTTTTTGTGGGCCTGGGCACGGCATCAGTATTGGGAGCCTTGGACAAAATGGAGATGAAGCTAGAGTAGAAGAGGTACATGTGCGGAATTGCACCTTAAATGGAACTCTGAATGGAGTCAGAATCAAGACGTGGATGGGAGGATCGGGTTATGCTAGGAAGATCACATTTGAAGATATTGTGGTTGTTGGAGTTAATCAACCTGTGGTTATTAACCAACATTATACTGGTATTGAAGAAAAGAGTGGAGGAGAAGCAGTGAAAATAAGTGATGTTACATATAGCAACGTCAAGGGAACAGCTAGCTCTGTGGAGGGAGTGATATTGAATTGTGATGCCAAAGTTGGTTGCACCCACATAGTATTGGAAGATATACATATAACCAGGGATGATGGGGATAAAACACACGCCTCATGCACTAATTCACATGGCATCTGTAAGCACTGTGATCCAATTGTCCCCTGTCTTTTGCCCTCATAA 1215 0.4222 MKGVFVVLLVFVTVSRSFFGRASPSPCFNVASYGARGNGKTDDSEAFLKAWKDVCNATQETATLVIPKLKTFMLQPILFQGPCKPSTINIELQGSMIAPKSVNSWKWRNSDRKWVQFSNINGLVINGEGQIDGQGHPWWNSNVSNRPPYNVTGSLHVKVLQFHSCGNLSLNGTTHINSPKNHISIDMCNGVHISNIHIIAPMHSPNTDGIDIAGSSNVLIKNSTIETGDDCIAINSGSSLINISGIFCGPGHGISIGSLGQNGDEARVEEVHVRNCTLNGTLNGVRIKTWMGGSGYARKITFEDIVVVGVNQPVVINQHYTGIEEKSGGEAVKISDVTYSNVKGTASSVEGVILNCDAKVGCTHIVLEDIHITRDDGDKTHASCTNSHGICKHCDPIVPCLLPS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02435 404 PANTHER - 27 389 - -
Pste7g02435 404 Pfam Glycosyl hydrolases family 28 60 388 IPR000743 GO:0004650|GO:0005975
Pste7g02435 404 SUPERFAMILY Pectin lyase-like 22 401 IPR011050 -
Pste7g02435 404 ProSitePatterns Polygalacturonase active site. 245 258 IPR000743 GO:0004650|GO:0005975
Pste7g02435 404 Gene3D - 19 396 IPR012334 -
Pste7g02435 404 SMART pbh1 362 394 IPR006626 -
Pste7g02435 404 SMART pbh1 297 318 IPR006626 -
Pste7g02435 404 SMART pbh1 215 236 IPR006626 -
Pste7g02435 404 SMART pbh1 188 214 IPR006626 -
Pste7g02435 404 SMART pbh1 238 258 IPR006626 -
Pste7g02435 404 SMART pbh1 268 289 IPR006626 -
Pste7g02435 404 SMART pbh1 329 356 IPR006626 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02435 Pste-Chr7 23230037 23231688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02435 28 401 Glycoside Hydrolase AT5G27530 45.745 2.50e-114 340