Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02425 ATGCAGCCAAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGAGAGGGAGAGGGAGAGGGAGCAACAGCGCCTTCCCAAAACCCTTTGCGAAATTCCCATCCCTCACTAGTCAAATTTGCGGCGCATCTCTCCACCGATTCGCTGACACAGTTTCAGACTCAAAGCACACAACCCTTCTGCTTGAGAATTACCATCTCCATGACAGCCTCCGAACCTTACTTGCTAAGCTTGAGAGCCAAGATTCCAACCCTCTTCACTTGCTCGCAGAATATGGTGATTGGTCCAAAGACCATTTTTGGGCCGTTATTAGGTTCCTTAAAAATGCCTCAAGGTTCACCGAAATCCTTCAGGTGTTTGATATGTGGAAGGACGTTGAGAAATCTCGGATTAGTGAGTTCAACTATAACAAGATCATAGGGTTGTTATCTGAAGTAGGAATGCTGGAAGATGCATTATCTGCATTGCAGGAGATGGAAGTTCAAGGTCTCAAGCCTTCTTTGGATACTTACAATCCAATAATTCACGGTTTATCCAGAAAAGGTAAGTTCAGTGATGCTTTACGCCTTTTTAATGAGATGAAAGAATCTGGCTTAGAGCCGGATAGTGAAACTTATGATGGTTTGATTGGAGCCTACGGGAAATTTCAAATGTATGATCAGATGGGTGAGTGTGTGAAAAAGATGGAGTTGAATGGATGTTCTCCAGATCATATAACTTGTAATATACTTATCCAAGAGTATGCTCGTGGTGCGTTGCTCCATAAAATGGAAAAGCTATATAAAAAAATGCTTTCCAAAAGAATGCATTTGCAATCTTCTACTTTAGTTGCTATGCTAGAGGCTTATACCACATTTGGGATTGTTCAAAAGATGGAAAAATTTTACACAAAAGTCTTGAAATCAAAAACATGTCTAGAGGATGATTTCATTAGAAAACTGGCTGAAGTCTATATAAAAAACTACATGTTTTCTAGATTAGAAGACCTGGCATTAGATTTATGTTCAGCATTTGGTGACAGCGACCTTGTATGGTGTCTCCGACTCCTTTCTTATGCATGTCTTTTGAGTAAAAAAGGCATGGATATAGTTGTTCGAGAAATGCGAGATGCCAAGGTTAATTGGAATGTGACTGTTGCTAATATTATCATGTTGGCTTATGTGAAGATGAAGGATTTCAGGCATTTGAGAATTTTGCTCTCCCAATTGCCAATCTATCGGGTGCGGCCTGATATAGTCACTATTGGAATTCTATTTGATGCCAACAGAATTGGTTTTGATGGTAGTGGAGCTTTAGAAACATGGAGGAGAATGGGCTATCTATACAGAGTAGTAGAAATGGAAACAGATTCTCTGGTCCTTACTGCATTTGGGAAAGGTCATTTTCTTAAAAGCTGTGAAGAAGTGTATTCTTCCCTTCAACCTGAGGACAGAGAAAGGAAAACATGGACTTACTCTGATCTCATTGCTTTATTGTCCAAACATACTGGTAACATCGTCTGTATGGAACCAAGATAG 1521 0.407 MQPRERERERERERERRGRGRGSNSAFPKPFAKFPSLTSQICGASLHRFADTVSDSKHTTLLLENYHLHDSLRTLLAKLESQDSNPLHLLAEYGDWSKDHFWAVIRFLKNASRFTEILQVFDMWKDVEKSRISEFNYNKIIGLLSEVGMLEDALSALQEMEVQGLKPSLDTYNPIIHGLSRKGKFSDALRLFNEMKESGLEPDSETYDGLIGAYGKFQMYDQMGECVKKMELNGCSPDHITCNILIQEYARGALLHKMEKLYKKMLSKRMHLQSSTLVAMLEAYTTFGIVQKMEKFYTKVLKSKTCLEDDFIRKLAEVYIKNYMFSRLEDLALDLCSAFGDSDLVWCLRLLSYACLLSKKGMDIVVREMRDAKVNWNVTVANIIMLAYVKMKDFRHLRILLSQLPIYRVRPDIVTIGILFDANRIGFDGSGALETWRRMGYLYRVVEMETDSLVLTAFGKGHFLKSCEEVYSSLQPEDRERKTWTYSDLIALLSKHTGNIVCMEPR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02425 506 Gene3D Tetratricopeptide repeat domain 331 504 IPR011990 GO:0005515
Pste7g02425 506 Gene3D Tetratricopeptide repeat domain 82 213 IPR011990 GO:0005515
Pste7g02425 506 MobiDBLite consensus disorder prediction 1 22 - -
Pste7g02425 506 MobiDBLite consensus disorder prediction 1 29 - -
Pste7g02425 506 NCBIfam pentatricopeptide repeat 137 168 IPR002885 -
Pste7g02425 506 NCBIfam pentatricopeptide repeat 240 270 IPR002885 -
Pste7g02425 506 NCBIfam pentatricopeptide repeat 206 238 IPR002885 -
Pste7g02425 506 NCBIfam pentatricopeptide repeat 171 204 IPR002885 -
Pste7g02425 506 PANTHER OS08G0520200 PROTEIN 51 498 - -
Pste7g02425 506 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 203 237 IPR002885 -
Pste7g02425 506 Gene3D Tetratricopeptide repeat domain 214 330 IPR011990 GO:0005515
Pste7g02425 506 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 168 202 IPR002885 -
Pste7g02425 506 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 238 272 IPR002885 -
Pste7g02425 506 Pfam PPR repeat family 171 214 IPR002885 -
Pste7g02425 506 Pfam PPR repeat 240 269 IPR002885 -
Pste7g02425 506 Pfam PPR repeat 137 164 IPR002885 -
Pste7g02425 506 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 133 167 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02425 96 439 Glycosyltransferase AT1G05670 19.771 6.78e-10 59.7