Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02408 AGACACCAAGAGAGGTCCATGGGTAGTACCAAGAGTACTTCTGTGGTTCAGCTGTTTGTTTTATTGTTAACTGTAATCAATGCTAATGGAATGCTTAAATTCTATTTCAAATCTCATCTTGGTCTTGTCATGGAGTGGAATGCAAAATCTCTCGGGCAATGGGACTGGGAGCACTTATTCTTCTTCAATACAAAAGCAACAGAAAATGCCAGGTTACATCCAACTGATTGTAGCGGTGAAGCAGATCGAGAAATCAATGTTGGGGCGTTGTATCCATCAGGTGGTAGTGCTTGCTCTGGCTCTGAACTAATACATGCTTCTTCATCAAGGAGCTCAAAGTCAGCTTCCAACAATTCTTCATCAAATGGGGATAGCAAGGCATCTATATTGACTCTTGAAGGATCTCAGGATGATTCCACTGGGAAGAAAGATTTGTGCAATGGAGAACCAGTTGAAACTTCTCCAGCAGCTGTGCCCTCTCCTGTCTCTGGTGAACCGTTGCTCACTCTAAAGCTTGGCAAACGATTATACTTTGAGGATGTTTGCACAGGAAGTGATTCCAAGAAACCATCTTCATTTGAGGTTCCCGTTTCATCAGGAAAGAAATATAAAACCAGTAGTCAGAATTTACAGCACCCAAGCTGCCAGGTGGAAGGCTGTGGCCTTGACCTCTCGTCTGCTAAAGATTACCATCGCAAACACAGAGTTTGCGAAACTCATTCCAAATCCCCTAAGGTGGTTATAGCTGGTTTGGAACGACGATTTTGCCAGCAATGTAGCAGGTTCCATGCTCTGTCAGAGTTTGATGACAAAAAAAGAAGCTGTAGACGCCGTCTTTCAGATCACAATGCAAGGCGCCGCAAGCCCCAGTCTGATGCAATCCAATTAAACCCATCAGCTTTGTCTTCATCACCCTATGATGTGAGGCAAATAGTGAGCCCATTTGTATTTTCAAGGACAGCTACAAATTTAGCGTGGCAACACATGCACAGCAACAAGCTCCCCCAGACAAAAGAATTCCTTCCGAAGCCTGCAAAAGCCTTCAATAAGATACCTAGTATTGTCTCTATGGTTTCTGATGATTCTAGTGGCCTTCTAACATCCAGAGGCATAGCAACGAAGACTACTGTTCCAGGTTTAGAAGATCCCATTACTTCGTGTGATCCAAATGCAACACAAGATGTTAACCGTGCTCTCTCTCTTCTGTCAACAAATTCATGGGGTCCATATGAGACTAAGTCCCTTTCCCTGGAACACTGCACTCGGACAACTGGCAGTGGCATCACTCAGTCCATAACACACTCAATGAATCAGCAGCGCTTACCACTTCCTTCCTCAGAATATTGGCACACTGATCAACAACCACCAACCCCTTCCACCATGTGTATCTCTTTCTCGGATTGTGATGGCACCAATCGTTTTCAAGACTTTCAGTTGCTGAGTACATCCTATGAATCAGGCTTTCCTTGCAACCAACTGGATTGACAACTTTCTAGAGTGCCTGGTGCTGTCTTTCCTTTTGAAATGGATATTCATTAAACTGGGAACTCCCTCTTCTAAATGCTGACATCTATGTTATCTTGTAAACCTGTAAGACATTTTCATTGTGTACAACACTTTGGTCATTTCATTCAAACCTTAAGTTCTGCTTATGTCTCCACCGAGAACTTTTTATCCCATGCCTTCCTACTCTATTACTCAGGTTACGCTCATATCCTCCACGGGCATCGTAATACCTACCTTCTATGCTTATCAATAACCAAAACAACTTTTTGCAGGTATGTCCCTGTATTGTTTCAACCAATGTTATCGGACTCGGTTAAG 1824 0.4326 RHQERSMGSTKSTSVVQLFVLLLTVINANGMLKFYFKSHLGLVMEWNAKSLGQWDWEHLFFFNTKATENARLHPTDCSGEADREINVGALYPSGGSACSGSELIHASSSRSSKSASNNSSSNGDSKASILTLEGSQDDSTGKKDLCNGEPVETSPAAVPSPVSGEPLLTLKLGKRLYFEDVCTGSDSKKPSSFEVPVSSGKKYKTSSQNLQHPSCQVEGCGLDLSSAKDYHRKHRVCETHSKSPKVVIAGLERRFCQQCSRFHALSEFDDKKRSCRRRLSDHNARRRKPQSDAIQLNPSALSSSPYDVRQIVSPFVFSRTATNLAWQHMHSNKLPQTKEFLPKPAKAFNKIPSIVSMVSDDSSGLLTSRGIATKTTVPGLEDPITSCDPNATQDVNRALSLLSTNSWGPYETKSLSLEHCTRTTGSGITQSITHSMNQQRLPLPSSEYWHTDQQPPTPSTMCISFSDCDGTNRFQDFQLLSTSYESGFPCNQLD 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02408 494 MobiDBLite consensus disorder prediction 185 207 - -
Pste7g02408 494 FunFam Squamosa promoter-binding-like protein 14 206 276 - -
Pste7g02408 494 ProSiteProfiles Zinc finger SBP-type profile. 212 289 IPR004333 GO:0003677
Pste7g02408 494 MobiDBLite consensus disorder prediction 133 163 - -
Pste7g02408 494 Gene3D - 205 276 IPR036893 GO:0003677|GO:0005634
Pste7g02408 494 Pfam SBP domain 215 288 IPR004333 GO:0003677
Pste7g02408 494 SUPERFAMILY SBT domain 213 294 IPR036893 GO:0003677|GO:0005634
Pste7g02408 494 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 101 426 IPR044817 GO:0003677
Pste7g02408 494 MobiDBLite consensus disorder prediction 184 207 - -
Pste7g02408 494 MobiDBLite consensus disorder prediction 279 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02408 Pste-Chr7 22824486 22830338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02408 44 406 SBP-box Gene Family AT5G43270 39.467 3.24e-61 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pste7g02408 SBP 4.5e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02408 7 22824486 22830338 Pste7g02408 7 22824486 22830338 ECH