Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02389 GGGAAATCAAATGTGCCATCTCTCATTTGCATTTCCTCTCTGTCCTCGTGCAACAATTTTAGCTCTTCCGTTTCGACCTGTCTCTGAACGTAACAACTAAACCCACAGATCTTCTCCCCAACCCTCAACCCATGTTTTTATTGCCCACCTCATGATTCATTTCATTGCGTTTCTTCTCTTCTGCCGTTGATGCTAGTTAGCACCCAAATTTACACAGTGGATGTGAATAATGGATGTTGCAGAGCTAGAAGAAAGTCTTTTTGCAGCATGCGATGCCAAGTTACATGGAGAAATGTGCAAGTCTCTTTCTGCAATATACAGCAAGATATTGTCATTATTTCCTTCTTTAGAAGCAGCTAGACCTAGGAGCAAATCAGGAATTCAGGCATTATGTTCATTGCATGTAGCCTTAGAAAAGGCAAAGAATGTTCTTCAGCACTGCTCAGATTGTAGTAAACTATACTTGGCTGTAACTGGGGATTCTGTTCTTCTAAAATTTGAGAAGGTCAAAAGTTCTCTTGAGGATAGTCTTAAACGGGTGGAAGATATTGTTCCTCAATCTATTGGTTGTCAGATTGATGAAATTGTGAGTGAACTTGCAAGTACAATATTTGCTCTTGATCCATCAGAGAAGCAACTTGGGAATGATTTAATTTCATTGCTTCAGCAGGGAAGAAAGTTTAATGATTCTAATGATAGTAATGAACTTGAATGTTTTCATCTTGCTGCTAGTAGACTAGGAATCACTTCTTCAAGAGCAGCTCTTGCAGAAAGAAGAGCTCTAAAAAAACTCATAGAAATGGCTCGTGCTGAGGAAGACAAGCGGAAAGAATCAATTATTGCTTATCTTTTACACCTTATGAGGAAATATTCCAAGTTATTTAGAAGTGATTTCTCTGATGATAATGATTCCCAGGGTTCTCAACCTTGTTCTCCCACTGTTCAGAGATCTCTTGAGGATCGCATTCCTGGTGGCCAATGTCATGTCTTTGATAAACAACTTTCAAAACTTAGTTCCTTTAATTTTAAGTCAAATAATAGGGAATCAGGGCAGATGCTTCTTCCACCTGAAGAGTTAAGGTGCCCAATATCTCTTCAACTAATGAGTGATCCGGTTATAATTGCTTCTGGGCAAACATATGAAAGGGCTTGTATAGCGAAATGGTTCATGGATGGGCACAACACCTGCCCAAAGACTCAACAGAAACTTTCACATCTTTGTTTGACTCCTAATTACTGTGTTAAGGGTCTTGTCATTAGTTGGTGTGAACAGAATGGAGTTCCAATTCCTGAAGGTCCTCCTGAATCTCTTGATTTTAACTACTGGCGATTGGCATTATCAGATTCTGAATCTGTAAATTCAAGATCGGTAAGTAGTGTTGGCTCTTGCAAGCTGAAGGGTGTCAAAGTTGTTCCTGTAGAGGAGAGTAGCATCTCAGAGCAAACAGAGGTAAATGCAACTGAAAGTTTTTCTGCACAACAGGAAGATAATGAACAGTATCTTGGTTTTCTTAAAGTGTTGATAGAAGGGAACAATTGGAAGAGGAAGTGTAAAGTGGTAGAACAGTTGAGGCTGTTGTTACGGGATGATGAGGAAGCCAGGATTTTTATGGGGGCTCATGGATTTGTTGAAGCACTTATGCAGTTTCTACAATCAGCTGTGCAAGAAGGGAATGTGAGCGCTCTTGAAAATGGAGCTATGGCTTTGTTCAACCTAGCTGTGAATAACAACAGAAATAAGGAAATTATGATATCATCAGGAATCTTATTGTTGTTAGAGGAAATTATTTCAAAAACTAGTTCATATGGTTGTGCAGCAGCCCTGTATCTGAATCTTTCTTGCCTTGAAGAAGCCAAGCATGTGATTTGCACGAGTCAGGCTGTCCAATTTCTAATCCAGATTCTTCAAGCCAAGACAGAAGTTCAGTGCAAGCTAGATTCCCTCCATGCACTCTACAATCTGTCTACTGTGAACTCTAATATTCCAAACCTCCTTTCGTCTGGAATAATTCATAGCCTACAATCCCTTCTTGTAGGCCAGGGTGATTGCATGTGGACAGAAAAATGCATAGCCGTTTTGATAAATTTGGCGGTTTCTCCAGCTGGAAGAGAGGAAATAATGTTGGCTCCTGGACTCATAAGCTCCTTGGCTTCCATTTTGGATACTGGTGAGCTCTTAGAGCAGGAGCAAGCTGCTTCTTGTCTCCTAATTTTGTGTAACAGGAGTGAGGAATGTTGTGAGATGGTCCTGCAGGAAGGGGTTATACCTGCATTGGTGTCTATATCGGTGAATGGGACCTCGAGAGGAAGAGAAAAAGCTCAGAAGCTATTGATGGTATTCCGAGAGCAGAGACAACGAGACCATTCACCTGTTAGGACTGATCAATGTCAATCTCAAAGTAGTGATTTGTCTATGCCTCCTCCTGAAACGAAACCACTTTGTAAATCAATATCTAGAAGAAAGGTAGGGAAAGCTTTTAGCTTTCTCTGGAAAAGCAAGAGCTATTCAGTTTACCAGTGT 2521 0.4046 MDVAELEESLFAACDAKLHGEMCKSLSAIYSKILSLFPSLEAARPRSKSGIQALCSLHVALEKAKNVLQHCSDCSKLYLAVTGDSVLLKFEKVKSSLEDSLKRVEDIVPQSIGCQIDEIVSELASTIFALDPSEKQLGNDLISLLQQGRKFNDSNDSNELECFHLAASRLGITSSRAALAERRALKKLIEMARAEEDKRKESIIAYLLHLMRKYSKLFRSDFSDDNDSQGSQPCSPTVQRSLEDRIPGGQCHVFDKQLSKLSSFNFKSNNRESGQMLLPPEELRCPISLQLMSDPVIIASGQTYERACIAKWFMDGHNTCPKTQQKLSHLCLTPNYCVKGLVISWCEQNGVPIPEGPPESLDFNYWRLALSDSESVNSRSVSSVGSCKLKGVKVVPVEESSISEQTEVNATESFSAQQEDNEQYLGFLKVLIEGNNWKRKCKVVEQLRLLLRDDEEARIFMGAHGFVEALMQFLQSAVQEGNVSALENGAMALFNLAVNNNRNKEIMISSGILLLLEEIISKTSSYGCAAALYLNLSCLEEAKHVICTSQAVQFLIQILQAKTEVQCKLDSLHALYNLSTVNSNIPNLLSSGIIHSLQSLLVGQGDCMWTEKCIAVLINLAVSPAGREEIMLAPGLISSLASILDTGELLEQEQAASCLLILCNRSEECCEMVLQEGVIPALVSISVNGTSRGREKAQKLLMVFREQRQRDHSPVRTDQCQSQSSDLSMPPPETKPLCKSISRRKVGKAFSFLWKSKSYSVYQC 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02389 764 ProSiteProfiles U-box domain profile. 278 352 IPR003613 GO:0004842|GO:0016567
Pste7g02389 764 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 352 IPR013083 -
Pste7g02389 764 CDD RING-Ubox_PUB 280 332 IPR045210 -
Pste7g02389 764 FunFam RING-type E3 ubiquitin transferase 278 352 - -
Pste7g02389 764 MobiDBLite consensus disorder prediction 707 734 - -
Pste7g02389 764 Gene3D - 421 605 IPR011989 -
Pste7g02389 764 SMART arm_5 454 498 IPR000225 GO:0005515
Pste7g02389 764 SMART arm_5 539 580 IPR000225 GO:0005515
Pste7g02389 764 SMART arm_5 623 664 IPR000225 GO:0005515
Pste7g02389 764 Pfam U-box domain 280 349 IPR003613 GO:0004842|GO:0016567
Pste7g02389 764 SUPERFAMILY RING/U-box 269 354 - -
Pste7g02389 764 SUPERFAMILY ARM repeat 426 706 IPR016024 -
Pste7g02389 764 Gene3D - 606 719 IPR011989 -
Pste7g02389 764 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 465 511 IPR000225 GO:0005515
Pste7g02389 764 Gene3D - 8 105 IPR036537 GO:0007166
Pste7g02389 764 PANTHER U BOX DOMAIN-CONTAINING 21 705 - -
Pste7g02389 764 MobiDBLite consensus disorder prediction 716 730 - -
Pste7g02389 764 SMART Ubox_2 282 345 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02389 Pste-Chr7 22647637 22652816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02389 1 763 U-box Gene Family AT1G24330 64.396 0.0 1003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02389 7 22647637 22652816 Pste7g02389 7 22647637 22652816 ECH
Pste7g02389 7 22647637 22652816 Pste3g02723 3 20020600 20025334 PCT