Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02374 GGAAAGAAGGAGTTAGTCTCTTATTACTTTACACATTTTTCTAAGGCATACAGTGAAGAAGATATGTGGATGGTGTTTAAAAAACAGGGGTCGGTCAAAGAGGTATTCATAACTAGAAAGAGGAATGGAATAGGTGAGAGGTATGCGTTTGTAAGATTTATTGATGTAGATGATAAGAGGCTTTTAGAAAGGAAACTTGATAATATATGGATTGGAGATCTAAAGATCTTTGTCAACTTCCTAAAAATCAGGAAAACAATAGAAAAGAAAGAAGGAAAGAAGGAGTTAGTCTCTTATTATTTTACACATTTTCCTAAGGCATACAGTGAAGAAGATATGTGGATGGTGTTTAAAAAACAGGGGTCGGTCAAAGAGGTATTCATAACTAGAAAGAGGAATGGAATAGGTGAGAGGTATGCGTTTATAAGATTTATTGATGTAGATGATAAGAGGCTTTTAGAAAGGAAACTTGATAATATATGGATTGGAGATCTAAAGATCTTCGTCAACTTCCTAAAGTCTGAAATAGAAAAGACATATGCAATGGCATTGAAAGCCACAAGCGAGTATTATGTAATGAATGGAATTAACATAAGCCACAATACACAAAGAGCAGGAGTAAGAATTTGGGGTGGTTATGTGAAAGTTGAAGCGGAGAACAAGGATTGGCTAAATGGAAGCTTTGTGGGGGAGAGGGCTCAACTCTATAAATTTAAGGCACATGGGAAACAATTTAATGCTTCTCAGGAGAGAGAAAGGTGTAGACCTAGGAAACATTATTATAGAAGAATAGGAATGGCTAGAGGGTTTCTTATACATTTATGGTGGAATGATACATTTAAGAAGATGGCATTATACATGGGAGATTACATCAAGATGGATTCTCAAACAGAAAATATGGAAACC 906 0.3532 GKKELVSYYFTHFSKAYSEEDMWMVFKKQGSVKEVFITRKRNGIGERYAFVRFIDVDDKRLLERKLDNIWIGDLKIFVNFLKIRKTIEKKEGKKELVSYYFTHFPKAYSEEDMWMVFKKQGSVKEVFITRKRNGIGERYAFIRFIDVDDKRLLERKLDNIWIGDLKIFVNFLKSEIEKTYAMALKATSEYYVMNGINISHNTQRAGVRIWGGYVKVEAENKDWLNGSFVGERAQLYKFKAHGKQFNASQERERCRPRKHYYRRIGMARGFLIHLWWNDTFKKMALYMGDYIKMDSQTENMET 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02374 302 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 97 174 IPR000504 GO:0003723
Pste7g02374 302 SUPERFAMILY RNA-binding domain, RBD 12 173 IPR035979 GO:0003676
Pste7g02374 302 CDD RRM_SF 9 79 - -
Pste7g02374 302 SMART rrm1_1 7 79 IPR000504 GO:0003723
Pste7g02374 302 SMART rrm1_1 98 170 IPR000504 GO:0003723
Pste7g02374 302 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 73 IPR000504 GO:0003723
Pste7g02374 302 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 103 164 IPR000504 GO:0003723
Pste7g02374 302 Gene3D - 98 184 IPR012677 -
Pste7g02374 302 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 98 200 - -
Pste7g02374 302 Gene3D - 6 96 IPR012677 -
Pste7g02374 302 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 83 IPR000504 GO:0003723
Pste7g02374 302 CDD RRM_SF 100 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02374 Pste-Chr7 22498479 22499687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02374 22 169 Eukaryotic Initiation Factors Gene Family AT1G71770 18.000 5.20e-06 45.8