Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02368 ATGAGGGTATGCAAGAGGAAAAGAAGGGTTGATGATGATGATATTGATGATGATTTGGGAGAAACCTCTAGTTGTGCACATGGAAAATTGAGTTCAATCAAAAGAATGAGGCATAAGGGTAAGGGAGAAAGTTCCCAGTCTTCACAACATTGTTGTGGTCATGCAACTGTTATCCATTGGTTAATAGATAACAATGTGGTGGGTCATGGTGAAAATAACCTGGTAAAGACAGGAAAGCTATGGCATATTGGCATTGCTTGTGATTGTTGTGGCATGCTTTTCTCTCCCACTCGGTTTGAGGCTCACGTTAGGTGCCACAAGCAGACACCAACTACTGGCATTTTCTTGGAAGATGGAAGGTCATTCTTAGATTGTAAAAAACAAGCCTGGAATTCTCAGCAAAACTTGTGTCCTCTCATGACAATAGAAGAAATGAATCACTGTGAGTATCAAAATGATAGCATTTGTGATGTTTGTAATAATTATGATGGTGAACTAGTTCTATGTAATGGATGTCTCTCTTCATTTCACCCCAGTTGTTTAGGTTTAGAGCATGTTCTTGATGGTGATTGGTTTTGTATTGTGTGTTGTAGAAAAATATGCAAGCAATTTAGATGCACACAAGATAGAGCTGAAAATATGGATGTTAATAGTGTTCTAGGTTGTCATCAGTGTGAGGGAACATACCATATTGCATGCTTAAAAGCTCTAGCGAATACTAATATGGGAAAGGAAGAAAACCATGTTGATAATGAGCATAGATTTTTCAGTGGAGATTGTGAGAAGGTGTTTTTAAGTTTGCAGAAGCTGGTGGGAAAAGCGATTACTGTTGGTACAAATGATCTAACTTGGAGGTTATTGAAGTTAGGGAAAAGTGATAGTAGTGTTATTGATGATCTCTTAGGGAGAGAAATTATGGCTTATGTTGTTTTCAGTAGAAAGCTTGATCGATTGAACCTTCGTGGCTTTTATACAGTGGTTTTGGAGAAGGATAAGGAGGTGGTTTCTATTACCATTATAAGTATATTTGGTAAGAGAGTTGCGGAAATACCATTATTGTGGCAACCAAGATGCAGTGTAGAAGACGAGGCATGA 1095 0.3808 MRVCKRKRRVDDDDIDDDLGETSSCAHGKLSSIKRMRHKGKGESSQSSQHCCGHATVIHWLIDNNVVGHGENNLVKTGKLWHIGIACDCCGMLFSPTRFEAHVRCHKQTPTTGIFLEDGRSFLDCKKQAWNSQQNLCPLMTIEEMNHCEYQNDSICDVCNNYDGELVLCNGCLSSFHPSCLGLEHVLDGDWFCIVCCRKICKQFRCTQDRAENMDVNSVLGCHQCEGTYHIACLKALANTNMGKEENHVDNEHRFFSGDCEKVFLSLQKLVGKAITVGTNDLTWRLLKLGKSDSSVIDDLLGREIMAYVVFSRKLDRLNLRGFYTVVLEKDKEVVSITIISIFGKRVAEIPLLWQPRCSVEDEA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02368 364 SMART PHD_3 155 197 IPR001965 -
Pste7g02368 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 219 IPR013083 -
Pste7g02368 364 ProSiteProfiles Zinc finger PHD-type profile. 153 199 IPR019787 -
Pste7g02368 364 PANTHER PHD FINGER PROTEIN 12 296 352 IPR042163 GO:0003714|GO:0045892
Pste7g02368 364 Pfam PHD-finger 155 198 IPR019787 -
Pste7g02368 364 SUPERFAMILY FYVE/PHD zinc finger 150 203 IPR011011 -
Pste7g02368 364 Pfam Tify domain binding domain 78 129 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02368 Pste-Chr7 22395442 22396625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02368 26 353 PHD Transcription Factor Family AT5G58610 34.417 4.65e-57 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pste7g02368 TDBD 1e-14 No_clan