Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02293 TTCACATGTTTCACTGTTCTCTCGTATCTTCTCCATCCCGATAACGAAAACTTGAAATTGGCACTTCGCAGTCCTATAGAGAGAGAGAGAAAGGGAGAGAGAGAAGGATCAGTGAAAGATTCTTCTTCTTCTCCTCTAAGCTATCGACGATGAAGAATTACAATTCATGGTTTCCCTAAACTAAACTCGATTCTCCCTCTCTATCCTCTGATTTTTTCCATGGCCGATCACTCTGATTCTTCTCCTCTCGTTCCTCCCCTTCCTCTCGCTGACCCGTCCGAGATTGACCTCGAAGCTGGTCCTTCCGAACAAATCCAATGCCGAATTTGTCTCGAAACTGATGTCCTCTTAAACTTGGATTGTGAATTTGAGAAGCACGTTACTGATCAAGCTAAGCTGGTTATTGCAGCTATGTTGAGAACGGCTGCTAATGTATGTAGAGATTTTATAGCCCCTTGTAAGTGCAAAGGTACATCAAAATATGTGCATAGAGAATGTTTGGATCATTGGCGAGCAGTTAAGGAAGGGTTTGCCTTTGCTCATTGCACTACGTGCAAGGCTCCTTATCATTTGCGTGTTCATGTTGCTGCGGATAGGAAATGGCGTACCCTGAAATTTCGGTTTTTTGTCACAAGAGACATTTTGTTTATTTTTCTGTCTGTCCAGCTTGTCATTGCTTCACTGGCATATTTGGTTTTTCTAATAGATGGTTATGAGCAGTATTGGCTTCGTCTTCTTTGGGGTTTTGATAGTGAAATGAGCTTCTACTACATATGTGGAGCTCTATTGTTTTTTGCCTTGCTTGGCCTTTCTGGGTGCTTCATTACTTGTTATGATCGAAGAGTTCGCAATGATTTAGCTCAGCCTTGTAGAGAGTTATGTCTTTGTTGCTGTCAACCTGGAGTTTGTGCAGACTGTCATTTGCCAGGCACTCTTTGCATGTGGACTGATTGCACCACATGCTTTGAGAGTTGTGGAACCATGGCAACTGAATGTGGTGGTTGTTTGGGTGGTGCTGGGGAAGCGGGGCTACCATTATTATTCATAATGGCTTTGATTGTTCTGGGACTTTTTACCGTAATTGGGATATTCTACAGTGTATTGGTGGCTACCATGGTAGGTCAACGGATATGGCAACGCCATTATCACATACTTGCGAAAAGGATGTTAACAAAGGAGTATGTGGTTGAAGATGTTGATGGAGAGCTGACAGGATCTGATTGGTCTCCTCCGGCCCTACCACCAGAGCATGTTCAGCAGTTGAAAACATTGGGCCTGCTATGAGTTTGAAAGAGTCAACGGTCATCTACTTGATGACAAGAATGACAGTAGAGATACACTGGTCCTCCCCAACCCCATGTTATGGTAAAGTGGTCCTTTTCATGAAGACCTGCAGTTAATTGATTGTGTAATAGCTGCTCGTTTGGCTAGAGTTATACACTTTAACCGAACCGCTGATGTGTGGAAATTTGTGAATGTCTGACACGTCTACTTATGTAAAGAAAATGGAAGAGGATTCTTGTAATGCCCAGCAACGGATTACAGACTTACAGGTACATTACCATTTCATTTCCTTGATGCAAATGTTGCTTGGCAAGTCATGTTTTATTTGTTGCTTGTCTCTTTTGTTTTAAATTTTGATTTTTATTTGGATACTTTACTAATCAAGAATTCTAGCGATAGATTTTGATTTGGTATAATTCGTGGTACAAGCATATATTATTTGGAGTAAGGAAAAATATATGTTTGGTCCTGTATGTTCTAGGTCTTAGTTTTGTCTTCACTCTCTTATCTCACTATAGTTTTTTAACTTATTTTTTAGTTACAATTT 1831 0.408 MADHSDSSPLVPPLPLADPSEIDLEAGPSEQIQCRICLETDVLLNLDCEFEKHVTDQAKLVIAAMLRTAANVCRDFIAPCKCKGTSKYVHRECLDHWRAVKEGFAFAHCTTCKAPYHLRVHVAADRKWRTLKFRFFVTRDILFIFLSVQLVIASLAYLVFLIDGYEQYWLRLLWGFDSEMSFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCQPGVCADCHLPGTLCMWTDCTTCFESCGTMATECGGCLGGAGEAGLPLLFIMALIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGELTGSDWSPPALPPEHVQQLKTLGLL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02293 354 Pfam RING-variant domain 74 112 IPR011016 GO:0008270
Pste7g02293 354 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 20 353 - -
Pste7g02293 354 SUPERFAMILY RING/U-box 74 117 - -
Pste7g02293 354 ProSiteProfiles Zinc finger RING-CH-type profile. 26 119 IPR011016 GO:0008270
Pste7g02293 354 CDD RING_CH-C4HC3_MARCH 34 113 - -
Pste7g02293 354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 127 IPR013083 -
Pste7g02293 354 SMART ringv_2 33 113 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02293 Pste-Chr7 21212162 21218811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02293 1 354 C3H Transcription Factor Family AT2G22120 77.465 0.0 546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01799 3 11618542 11623369 Pste7g02293 7 21212162 21218811 PCT