Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02290 GTACAAACGTGGCCGAGGTGGAGGAAGAAATTAAAACATGCTTTAATTAAGTGAATCATGTGTTTATTTTGTGCTCCTCTTCAGCTTCTGATGTCTGCTCTTTCTTGATATTTAAGGTTCTGTTTGTTTATCAGTGGGTTTGTTAGCTATTAATTCCCTCTTCGCCTCTCTTCTAGTACTACGAAAGCTGAAACAGTGGCAATTAGATAATCTACTCTGCTGCCACCCTTTTGTCGCTTCTTGCTCCTGCAATCCTTTTATTCTTATTTTCTCTCCTCTTTGTTCCTGTTATTACTTTTTGAAGTGATTTGCAATCTTCAATGCATCTTAATATTGATTGAACTTTAATGCGTCTCTTTTCTTGTTTCCTTGACACTTGACAGTGGGTTTGCTGTATAGGTATGTGTTGACTGTTGAGTGCTTCCCTAGTTGCAACACTGATCAGTCCTTAGAGCATGAATTCAGCATCCCCCCAGTTCGTTTCCTCAAGAAGGATGAGTGTGTACGATCCGATCCACCATATTAGTATGTGGGGAGAAGGCTTCAAAACTAATGGTAATTTAAGTGCATCCATGCCTTTAATTGATGAGGCAGACATGAAGTTAGATAGTCAGTCAGAGGATGCTTCTCATGGTATACTGGGAGCACCTAATAAGTACGACCAAGAAGCTAACAAACCTGCTGATAAGATACAAAGACGTCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGCCGTTTGAGGAAAAAGGCCTATGTGCAGCAGTTAGAATCAAGTCGTTTGAAATTGATGCAGTTGGAGCAAGAGCTGGAACGTGCAAGACAGCAGGGAATGTATATAGGTGGTGGGTTGGATTCTAATCATCTGGGTTTTGCTGGATCAGTAAATTCAGAAAGTGACAGAATGTTTAAAGCCTTGCTATATGGCATGGAGAGTTATTTATATGTATCTGACATGATATCTGCTGCCAAACTGGATTATCTGGCTATTACAATTCCATACCTTTTCTTTGTTTGTTTTGTTACATTGATTGGATCTTGTACAAAAACAAATTTTCAAGGAATTACAACCTTTGAGATGGAGTATGGACACTGGGTGAACGAGCAAAATAGACAAATCACGGAACTGAGAAGTGCTTTAAATGCTCATATTGGTGACATAGAGCTCAGGATTCTGGTAGATGGTATGATGAACCACTATGCTGATATCTTTCGCATGAAATCTGCAGCTGCAAAAGCAGATGTTTTCTATGTTATGTCCGGTATGTGGAAAACAACAGCTGAAAGGTTTTTCCTGTGGATTGGAGGCTTTCGCCCCTCTGAGCTTCTAAAGGTTCTTGGTCCCCTGATTGAACCCCTGACGGAGCAACAACGGTTGGATATCTATAACCTTGGACAATCATGTCAGCAAGCAGAAGATGCCCTTTCACAAGGTATGGACAAACTCCGGCAAACACTTGCTGATAGTGTAGCAGCTGGACAATTCATGGAAGGAACTTATATTCCACAGATGACTTCTGCAATGGAGAAGTTGGAAGCTCTGGTGAGCTTTGTTAACCAGGCTGATCATCTTCGACAGGAAACATTGCAGCAAATGTCTCGAATACTTACTATCCGTCAGGCGGCTCGATGCTTGCTTGCTTTGGGGGAATATTTCCAACGCCTGAGGGCTTTGAGCTCCCTCTGGTCTAATAGATCCCGTGAACCTGCGTAGTCTCACAATGAGGTTACAAAAGGGAAAACTTGTAACATGAACGTCATGATGGCCACGAGCATCATTACCATGTATCATGTGAGGTCCAGGTTGCTCAAATTTTTCCTGCAGTTTTGCATTATGAACAAGTTGTAAATACGACTCCTAGCTCATTTTATGCATAAAAGTTTGTAAATAAATTAATTTTGGACACATGGTGTAGAGTGGATTGTTGCAAAATGAAATATTTAGAATATACCATGAGCCTGCGTGGAAGTTGGTCATGTAAAATTCATATAATGTCATCTTGTGTGCTGTTGAAAATGAATCGACTCTAGACTCTCGCAGTGGACAATTTATTTTTTGTCATTAGTTTGTTAGAAATATTGTTTAGTTGTTATTAGTTTGTAAGAAAGTTGTTAACTCCAATAGGCTCTATAAAATATAAATAGAGCGTTCATACAGCCTTATTGTATCTTTTATTCAATCAACTACAAAATGATGTTGGTGTTACTGTCCAA 2212 0.3987 MNSASPQFVSSRRMSVYDPIHHISMWGEGFKTNGNLSASMPLIDEADMKLDSQSEDASHGILGAPNKYDQEANKPADKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQLEQELERARQQGMYIGGGLDSNHLGFAGSVNSESDRMFKALLYGMESYLYVSDMISAAKLDYLAITIPYLFFVCFVTLIGSCTKTNFQGITTFEMEYGHWVNEQNRQITELRSALNAHIGDIELRILVDGMMNHYADIFRMKSAAAKADVFYVMSGMWKTTAERFFLWIGGFRPSELLKVLGPLIEPLTEQQRLDIYNLGQSCQQAEDALSQGMDKLRQTLADSVAAGQFMEGTYIPQMTSAMEKLEALVSFVNQADHLRQETLQQMSRILTIRQAARCLLALGEYFQRLRALSSLWSNRSREPA 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02290 418 Gene3D - 77 126 - -
Pste7g02290 418 Pfam Seed dormancy control 220 294 IPR025422 GO:0006351|GO:0043565
Pste7g02290 418 Pfam bZIP transcription factor 76 112 IPR004827 GO:0003700|GO:0006355
Pste7g02290 418 ProSiteProfiles DOG1 domain profile. 203 413 IPR025422 GO:0006351|GO:0043565
Pste7g02290 418 SMART brlzneu 74 134 IPR004827 GO:0003700|GO:0006355
Pste7g02290 418 FunFam BZIP family transcription factor 77 126 - -
Pste7g02290 418 CDD bZIP_HBP1b-like 78 130 - -
Pste7g02290 418 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 120 IPR004827 GO:0003700|GO:0006355
Pste7g02290 418 SUPERFAMILY Leucine zipper domain 78 120 IPR046347 GO:0003700|GO:0006355
Pste7g02290 418 Coils Coil 97 124 - -
Pste7g02290 418 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Pste7g02290 418 PANTHER TRANSCRIPTION FACTOR TGA9 2 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02290 Pste-Chr7 21179632 21185570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02290 1 418 Calmodulin-binding Proteins AT5G10030 61.429 4.23e-178 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste7g02290 DOG1 5.4e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02290 7 21179632 21185570 Pste7g02290 7 21179632 21185570 ECH
Pste3g01790 3 11556809 11559988 Pste7g02290 7 21179632 21185570 PCT