Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02274 ATGGCTTCTGGGGAGCAAAAGAGAGCAGCACTGCATGAGAAGCTGCAACTTCTTCGTTCTATCACCAACTCTCATGCTCTAAACAAAACCTCGATCTTAATAGATGCATCAAAGTATATCGAAGAGTTAAAACAAAAAGTAGAAAGACTGAATGAAGATGTAGCTAATGCACAAACTTCAAGTGACCCAAATGCTTTGCCTATGGTTACAGTAGAAACCTTGGAAAAGGGATTTCTTATACATGTTTTTTCAGCAAAGAGCTGCCCTGGTCTTCTTGTTTCCATATTGGAATCATTTGAAGAGATGGGTCTTAATGTGCTTGAAGCTAGGGTTATTTGTACTGACACCTTTCGATTTCATGCCGTTGGAGGAAAAGATGAAGAACAAGGTGAGAGCATTGATGAACAAGCTGTGAAACAGGCTACGGGACAAGCAATAAAGAACTGGAGCCAAAATGCTGACCCAAAGTAA 471 0.4034 MASGEQKRAALHEKLQLLRSITNSHALNKTSILIDASKYIEELKQKVERLNEDVANAQTSSDPNALPMVTVETLEKGFLIHVFSAKSCPGLLVSILESFEEMGLNVLEARVICTDTFRFHAVGGKDEEQGESIDEQAVKQATGQAIKNWSQNADPK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02274 156 ProSiteProfiles ACT domain profile. 80 152 IPR002912 -
Pste7g02274 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 6 151 - -
Pste7g02274 156 Coils Coil 33 60 - -
Pste7g02274 156 Gene3D - 3 64 IPR036638 GO:0046983
Pste7g02274 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 62 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02274 Pste-Chr7 21009246 21010672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02274 11 141 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.371 9.04e-10 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02274 7 21009246 21010672 Pste8g01084 8 5634482 5636056 ECH
Pste5g01918 5 12131614 12133697 Pste7g02274 7 21009246 21010672 ECH
Pste7g01744 7 16215134 16216854 Pste7g02274 7 21009246 21010672 ECH
Pste7g02274 7 21009246 21010672 Pste7g02274 7 21009246 21010672 ECH
Pste7g02274 7 21009246 21010672 Pste8g01084 8 5634482 5636056 PCT