Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02270 AACCTTTCACCGGAAAACTGATTCCGTTTCCGGCGACCTTCTCGCATCCATGGTGGAAGATTCTCGCCGCCACCTGATTGCACCGTTCGCGTTTTCTCACAATTTGCGGCGTTTGGTCCTTGAAGGTGTTTGATCTCTCCGCGACCTGGCTTCGAGCGTCGTTTTGGGAGAATGTGGCGAGGCTGAATGTCGTTTACGCCTCGCTCGTAATCCGTAATCTCCAGAATCGTGATCTACGGTTTGCCTCTGCGATTTGGATTCGCTTTTTTATTGTTTTATCGTTTTTTTTTTTTTGTGGCGATTTTTGAACGAAGACGGCGACCTACAGGGAGCAGCGTCTTCGTAATGAAATGGAGGGAGGAAGATTACGATTATCCATGGAAGCTAGAAATGGGTTAGAATATTTGAAACTGAAAAGGCTTCAACGAGCAAAATCTGCTACTGTTGGTGGCAATGCAACAAGCATTGCGAACACGATGAACAGAAGTGGAGGAGATGCTCTTAGAGCTTCTGCATCATGTAGCGTGAGATTGCATGGTGATGCTGATGGCTTTTCTAAGCGGAAGGTGAAAAAGTTTGACACAAGTGATCTGGCATGGACTGAGAAAATTCCGGAGTGTCCTGTATATTATCCAACAAAGGAGGAATTTGAGGATCCCTTGCTTTATTTGCAAAGAATAGCTCCTGAAGCTTCTAAATATGACATGGCTTCCAGTGTGTATTACCATTCCAGTCCTATTGAAAATGGTCTATTTATGGAAGCATCTTCCTGCATATGCAAGATTATTTCACCCTTGAGTGCTTCTGTTCCTGCTGGGGTTGTTTTAATGAGGGAGCAGGCAGGCTTCAAGTTTACAACTAGAGTGCAGCCCCTTCGTCTTGCCGAATGGGATACCGAAGACAAAGTCATGTTTTTCATGAGTGGAATAAATTATACATTTCGTGATTTTGAAAAGATGGCAAACAAGGCTTTTGAGCAAAGATATTGCAGTGCTGGATGTCTACCTGCCACATATTTGGAGAAAGAGTTTTGGAATGAAATTGGTTGTGGGAAGATGGAAACTGTTGAATATGCATGTGATGTTGATGGCAGTGCCTTTTCATCCTTGCCTACTGATCATCTTGGGAAAAGCAAATGGAATTTGAAGAAATTTTCATGGTTGCCCAAGTCTATTCTGCGGCTCTTGGAAACATCAATTCCAGGAGTAACAGAACCCATGCTATACATTGGAATGCTGTTTAGCATGTTTGCTTGGCATGTGGAAGATCATTATTTATACAGCATTAATTATCATCATTGTGGAGCATCAAAAACTTGGTATGGCATTCCAGGTCATGCAGCTTTGGAATTTGAAACGGTGGTGAGAGAACATGTGTATACTAATGATATTTTGTCAACTGGTGGGGAAGATGGAGCCTTTGATGTTCTCCTGGGGAAAACAACTTTGTTCCCACCAAATATTTTGTTGGAGCATGAAGTCCCTGTCTACAAGGCTGTTCAAAATCCAGGGGATTTTGTAATAACTTTCCCCAGAGCATATCATGCTGGCTTCAGTCATGGTTTCAACTGTGGAGAAGCGGTGAACTTTGCAATTGGTGATTGGTTTCCTTTAGGGGCTATTGCTAGCCAAAGATATGCACTTCTTCAGAGAGTGCCTTTGCTGCCCCATGAAGAACTTTTATGCAAAGAAGCAATGCTTCTGTATTCAAGATTAAAACTTGAAGATTCAGACATTCCCTCTGAAGATTTGTTGTCTCATAATTGTGTTAAGATTTCTTTTATTAATTTGATGCGCTTTCAACATTGTGCTTGTTGGCTCTTAATGAAATCAAGGGCATGTATAGGCATTTCCTCACATTCCAAGGGTACAATTCTTTGTAGCCTCTGCAAACGAGACTGCTATGTAGCTTATGTTGATTGTGAATGTCACATGCATCCAGCATGCCTTTGCCATGATATAGAATCTCTTGACTTCGATTGTGGGACCAAACACACACTTTATCTTAGGGAAGATGCTCCAGAAATGGAAGCCGCAGCCAAGAGATTTGAGCAGGAAGATGGAATATTGAATGAGATACTTAAGCAAATGGAAACTGACAAAAACGTGTATTCATACCCTTTGTCAAACATGTTCCAAATGGCTGAGGCAAATGGATATACACCTTATTGTGAGATGAAATTTGATTGCGTTACTAGTTTTTATACCACCCTAAAGCTGCCAACAAATAATCAACAATTTGTTATAGAAAGTCAATTTGTTTCTAGACCTGAAGTATCTTCTGCTGCATCTGCTCTATGTTCTCTTTCTGAACCTCCTCAAATCTCTGCTTCCAATACTGATGAGGCGCTTGCTAACTTTAAATTAGGTACTACTGATTTTGAAGAGATTCGTGAGAGAATATCCAATAATGCTTCTGGATCTTTGCGACCTCCTGTTCAGTATGAAAACCGTGATAAATCTATGGGCAATGTTGATAGTTTAGAGAAGTTCACTGTGGATAACGAGAGTGATGATTCTGATTCCGGGAATTTTAGGGTGAAGCGCCCCTCGTCTCTTAAGGCAGAGAGGAGAAATGCACTCAAGCAATTGAAGAATGTCCTTCACGAAGGAAGGAGTGTGAAACCTATAGATATCAGCAAAAACAGTCATGCTGTTAGTCATAAGGTTAATGGTGACATTTTCTCGAGGGACGGATTTGCAGGTGGAAATAGCATCCCCATATCAGTAAGATATAAGAAGACTAGTAACAAAGAAGTTAGTGGACGACAGCAACATTGCGGGACAGATAGGTCGCTGCAGACGTATAGGGAATCATCGCCACCCGAAGAGGTTGGTCCAAAGCGCCTTAAAGCTCGAGGTCCTTCATTTCTGGGCGTAGAGAGCAGATTGAATTGA 2897 0.4187 MEGGRLRLSMEARNGLEYLKLKRLQRAKSATVGGNATSIANTMNRSGGDALRASASCSVRLHGDADGFSKRKVKKFDTSDLAWTEKIPECPVYYPTKEEFEDPLLYLQRIAPEASKYDMASSVYYHSSPIENGLFMEASSCICKIISPLSASVPAGVVLMREQAGFKFTTRVQPLRLAEWDTEDKVMFFMSGINYTFRDFEKMANKAFEQRYCSAGCLPATYLEKEFWNEIGCGKMETVEYACDVDGSAFSSLPTDHLGKSKWNLKKFSWLPKSILRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYHHCGASKTWYGIPGHAALEFETVVREHVYTNDILSTGGEDGAFDVLLGKTTLFPPNILLEHEVPVYKAVQNPGDFVITFPRAYHAGFSHGFNCGEAVNFAIGDWFPLGAIASQRYALLQRVPLLPHEELLCKEAMLLYSRLKLEDSDIPSEDLLSHNCVKISFINLMRFQHCACWLLMKSRACIGISSHSKGTILCSLCKRDCYVAYVDCECHMHPACLCHDIESLDFDCGTKHTLYLREDAPEMEAAAKRFEQEDGILNEILKQMETDKNVYSYPLSNMFQMAEANGYTPYCEMKFDCVTSFYTTLKLPTNNQQFVIESQFVSRPEVSSAASALCSLSEPPQISASNTDEALANFKLGTTDFEEIRERISNNASGSLRPPVQYENRDKSMGNVDSLEKFTVDNESDDSDSGNFRVKRPSSLKAERRNALKQLKNVLHEGRSVKPIDISKNSHAVSHKVNGDIFSRDGFAGGNSIPISVRYKKTSNKEVSGRQQHCGTDRSLQTYRESSPPEEVGPKRLKARGPSFLGVESRLN 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02270 848 MobiDBLite consensus disorder prediction 798 822 - -
Pste7g02270 848 SMART cupin_9 257 430 IPR003347 -
Pste7g02270 848 MobiDBLite consensus disorder prediction 798 848 - -
Pste7g02270 848 FunFam Lysine-specific demethylase isoform A 130 457 - -
Pste7g02270 848 Gene3D Cupin 83 435 - -
Pste7g02270 848 PANTHER LYSINE-SPECIFIC DEMETHYLASE 82 819 - -
Pste7g02270 848 Pfam C5HC2 zinc finger 510 561 IPR004198 -
Pste7g02270 848 Pfam JmjC domain, hydroxylase 290 413 IPR003347 -
Pste7g02270 848 ProSiteProfiles JmjC domain profile. 260 430 IPR003347 -
Pste7g02270 848 MobiDBLite consensus disorder prediction 714 737 - -
Pste7g02270 848 Pfam jmjN domain 91 117 IPR003349 -
Pste7g02270 848 ProSiteProfiles JmjN domain profile. 90 131 IPR003349 -
Pste7g02270 848 SMART JmjN_1 89 122 IPR003349 -
Pste7g02270 848 SUPERFAMILY Clavaminate synthase-like 191 446 - -
Pste7g02270 848 MobiDBLite consensus disorder prediction 684 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02270 Pste-Chr7 20985391 20995786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02270 87 580 JUMONJI Transcription Factor Family AT2G34880 30.435 2.73e-57 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pste7g02270 JmjC 3.3e-39 CL0029