Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02253 GAGCGAGCACCAGCGGCGAAGCGCCACCGCCGACGCCGATGCTGAGTCAGAACGCGCCGCCGCCGTTCCTGAGCAAGACGTACGACATGGTGGACGACCCTTCGACGGACTCGATAGTGTCGTGGACTCCGACGAACAACAGCTTCGTCGTTTGGAACCCTCCCGAGTTCGCTAGAGACCTCTTGCCCAAACACTTCAAGCACAACAATTTCTCCAGCTTCGTTCGCCAGTTGAACACCTACGGTTTTAGGAAGGTAGATCCAGATCGCTGGGAATTTGCTAACGAGGGTTTTTTAAGGGGTCAAAAGCACTTGCTTAAGACTATAACTCGGCGGAAATCTACCCATGGTCATAATCATCAACAGGCACCACAATCACATGGACAAAGTTCACCAGTTGGGGCTTGTGTAGAAGTTGGGAAGTTTGGACTAGAGGAAGAGGTTGAGATTCTCAAGAGAGATAAGAATGTGCTCATGCAAGAGCTTGTGAGATTGAGGCAGCAGCAACAGGCTACTGATAACCAGATGCAGACTATGGTTCAGCGTCTTCAAGGAATGGAGCAACGACAACAACAAATGATGTCATTCCTTGCAAAGGCTGTTCAGAGCCCTGGCTTCTTAGCTCAATTTGTGCAACAGCAAAACGAGGGTAACAGGCGCCTAACAGAGGCAAACAAAAAACGTCGGCTTAAGCAGGATGGTATTGGTGAAATGGAACATACTGCTGCTTCTGATGGGCAAATTGTTAAATATCAACCTCTGATAAATGAAGCAGCCAAAGCAGTGATAAGGCAAATAATGAAATTAAATACTTCTCGTTTAGAACCTTTTAGTAATAACCCTGATAATTACTCGACTGGTGATCATTCACCATCGCCCGATGCAATTGACAGAGGAAACACTTTGAGCCGGACATCTGGAGTAACACTTCAAGAGGTCCCTCCAACTACTGTGCAGTCTTCTCACGTTCCATCTACGACAGGGTGTCAAGGGCATGGCCCCTCAACAGGAAAATCTGAGATTCTATCTTCTCCCCAAGTTGCGGCCTGTGAAGAAGTTACGAAAGCTCAGTACCCTAATATAAATGTTTCCATTGGAGAATCTAATGCCCCTGCTATCCCTGTTACTGAAACAGATGAAATCATGACGGACCTCTCCACAATACGAGATATGGTGGCAGGAAATATTCCTGATATTCCTCAGGAAAAGTATGTGGCGCCAGAAACTGGCAGCGAAGTATATATGGATCCTTCTTCATTTGGATTTGATGTCTCACTGCCCATGGATTTCGATAGTATTTCGCCTGAAACAGACATTGATGATTTGTTGAACAATCCTCACTTTTGGGATGATATTGTGCGAACTCCAGTATCAGAGGAGATTGAGACAAATGGTGCTGAATCATTTACCGAGAATGAGGTGCAGCCAATAGAAAATGGATGGGACAAATCTCAACCTCTTGACCAACTTACTGAGCAGATGGGCCTACTTTCTTCGGATGCAAAAAGAATT 1511 0.4606 MLSQNAPPPFLSKTYDMVDDPSTDSIVSWTPTNNSFVVWNPPEFARDLLPKHFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKTITRRKSTHGHNHQQAPQSHGQSSPVGACVEVGKFGLEEEVEILKRDKNVLMQELVRLRQQQQATDNQMQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFLAQFVQQQNEGNRRLTEANKKRRLKQDGIGEMEHTAASDGQIVKYQPLINEAAKAVIRQIMKLNTSRLEPFSNNPDNYSTGDHSPSPDAIDRGNTLSRTSGVTLQEVPPTTVQSSHVPSTTGCQGHGPSTGKSEILSSPQVAACEEVTKAQYPNINVSIGESNAPAIPVTETDEIMTDLSTIRDMVAGNIPDIPQEKYVAPETGSEVYMDPSSFGFDVSLPMDFDSISPETDIDDLLNNPHFWDDIVRTPVSEEIETNGAESFTENEVQPIENGWDKSQPLDQLTEQMGLLSSDAKRI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02253 491 Gene3D - 2 100 IPR036388 -
Pste7g02253 491 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste7g02253 491 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste7g02253 491 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste7g02253 491 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 258 IPR027725 -
Pste7g02253 491 MobiDBLite consensus disorder prediction 99 119 - -
Pste7g02253 491 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste7g02253 491 Coils Coil 128 155 - -
Pste7g02253 491 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste7g02253 491 MobiDBLite consensus disorder prediction 261 330 - -
Pste7g02253 491 FunFam Heat shock transcription factor 1 3 100 - -
Pste7g02253 491 SUPERFAMILY "Winged helix" DNA-binding domain 6 99 IPR036390 -
Pste7g02253 491 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02253 Pste-Chr7 20864078 20874108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02253 1 485 HSF AT1G32330 51.829 5.80e-157 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pste7g02253 HSF_DNA-bind 6.9e-33 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02253 7 20864078 20874108 Pste7g02253 7 20864078 20874108 ECH