Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02252 GGAAAACTAGCCGTTACTGAGTCTCTGAAATCAATCCCAATCCCCGCTCGCACCTACACTTGTTTATGTCAATCACGTGCTCCTCACTACAAAAACAAAATTCATCTCCTTCAACTCGATTATTCTCATCTCCTATTCAATCTCGTTATGGTAGTGGACAAAGGGAATCCCTCCTCACACTCCAAATGTGTGTGTGATAAGAAGAAAGAAAGATGGAAGACGACTGAATCCAAGGCACACAAACCATGTTGTTTTTTGTTTCTCTTTTGGGTGTGGACTCTTGTGCTCCCTTCTCCCACATGCGTTTTGTGTGAAGATGGGGTGATTGTGACGGCGTCAAACTTGTTGGCACTTGAAGCGTTCAAGCAAGAGTTGGTTGACCCTAAAGGCTTCTTGCAGAGCTGGAATGATAGTGGCTATGGAGCTTGCTCTGGATCTTGGGTTGGAATCAAGTGTGCTCAGGGACAGGTTATTGTAATCCAGCTTCCTTGGAAGGGATTCGGGGGCCGTATCACTAATAAAATTGCCCAACTTCAAGGCCTTAGGAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCAATCCCTTCAACTTTGGGACTTCTTCCCAATCTTAGAGGCCTTCAGTTATTCAACAATAGGCTAACTGGTTCTATTCCTCCTTCCTTAGGTTACTGCCCTTTGCTTCAGTCTCTTGATCTCAGCAACAATTTCCTCTCAGGAACAATCCCTTATACCATTGCCAATTCCACCAAGCTTTATTCACTTAACTTGAGTTTCAACTCCTTCTCTGGTCCTTTACCACCTACCCTAACTCGCTCTCTTTCTCTCACATTCCTTTCTCTTCAACATAATAATCTCTCTGCCTCCCTCCCTAATTCATGGGGCCAGGGGACTCCCAACAATGACTTCTTTAGGCTTCAAAATTTGATCCTAGATCATAACTTTTTCACTGGAAATATTCCCGCTTCTTTGGCTAGCTTAAAACAACTCAATCTGATTTCCCTTAGTCATAATAACTTTAGTGGACCTATTCCTAATGCAATAGGAAGCCTTTCCAGGCTTAGGACACTAGACATATCTAATAACGCCTTCAATGGGAGCTTGCCTGCTACCCTCTCGAATTTATCCTCACTCACATTGCTGAATGCTCAGAACAACCTCCTTGAAAATCAAATCCCTGAAACTTTAGGTAGACTGCGTAATCTTTCAGTTCTAATTTTGAGTAGGAATCAATTTAGTGGGCTTATTCCCTCAAGTATTGCAAACATTTCCACTCTTAGGCAGCTTGATTTGTCGCTGAATAATCTTAGTGGAGAAATTCCAGTTTCCTTTGACAGTCAACGTAGTCTTAATCTCTTCAATGTTTCTTACAATGATCTCTCTGGTTCTGTTCCCCGCCTACTTGCCAGGAAATTCAACTCAAGCTCGTTTGTGGGAAATATTCAACTATGCGGATACAGCTCTTCAACTCTATGTCCTTCACAAGCTCCATCAGAAGGAGTCACTGCCCCACCTCCTGGATTGTCAAAACACCACCATCATAGGAAGCTAAGCACCAAAGACGTAATTCTCATAGTAGCAGGAGTTCTCCTCATAATCCTGATCATACTTTGTTGCGTCCTGCTCTTCTGCCTGATCAGAAAGGGATCAACATCAAAGGCAGAGAATGGCAGGGCAGCAGCGACAGCGGTTTCTATGAGGACAGAAAAAGGAGTTCCTCCTGTTGCTGCTGGTGATGTTGAAGCAGGCGGGGAGGCTGGAGGGAAACTAGTCCATTTTGATGGACCAATAGCTTTTACAGCTGACGATCTCTTGTGTGCAACAGCTGAAATAATGGGAAAGAGCACCTATGGAACTGTGTATAAGGCTATATTGGAGGATGGAAGTCAAGTTGCAGTAAAGAGATTGAGAGAAAAGATCACTAAAGGTCAGAGAGAATTTGAATCAGAGGTCAGTGTTCTAGGAAAAATTAGACACCCCAACGTCTTGGCACTGAGGGCCTATTACTTGGGACCCAAAGGGGAAAAGCTTCTGGTTTTTTATTACATGCCTAGAGGAAGTCTTGCTTCTTTCCTGCATGGTGGTGGAACTGAAAAATCCATTGATTGGCCAACAAGGATGAAAATAGCACAGGACATTGCTAGTGGCTTGTTTTACCTTCATTCCCAGGAGAACATTATACATGGGAACCTTACATCCAGCAATGTGTTGCTAGATGAGAATACAACTGCAAAAATTGCAGATTTTGGTCTTTCTAGGTTGATGACAACTGCCGCTAATTCCAACGTGATAGCCACAGCTGGAGCTTTGGGATACCGGGCACCTGAGCTCTCAAAGCTTAAGAAAGCCAACACTAAAACTGATATTTACAGTCTTGGTGTTATCTTGTTAGAACTCCTAACGAGGAAGTCACCTGGGGTGTCTATGAATGGAGTAAATTTGCCACAGTGGGTTGCCTCTATTGTAAAAGAGGAGTGGACTAATGAGGTTTTTGATGCGGACTTGATGAGAGATGCATCGACTGTTGGCGATGAGTTGCTAAACACATTGAAGCTCGCTTTACACTGTGTTGATCCTTCTCCATCAGCTCGACCAGAAGTTCATCAAGTGCTTCAGCAGCTAGAAGAGATTAGGTCTGAGAGATCCGTCACAGCCAGTCCAGGGGATGATTCTTACACCATA 2685 0.4361 GKLAVTESLKSIPIPARTYTCLCQSRAPHYKNKIHLLQLDYSHLLFNLVMVVDKGNPSSHSKCVCDKKKERWKTTESKAHKPCCFLFLFWVWTLVLPSPTCVLCEDGVIVTASNLLALEAFKQELVDPKGFLQSWNDSGYGACSGSWVGIKCAQGQVIVIQLPWKGFGGRITNKIAQLQGLRKLSLHDNQIGGSIPSTLGLLPNLRGLQLFNNRLTGSIPPSLGYCPLLQSLDLSNNFLSGTIPYTIANSTKLYSLNLSFNSFSGPLPPTLTRSLSLTFLSLQHNNLSASLPNSWGQGTPNNDFFRLQNLILDHNFFTGNIPASLASLKQLNLISLSHNNFSGPIPNAIGSLSRLRTLDISNNAFNGSLPATLSNLSSLTLLNAQNNLLENQIPETLGRLRNLSVLILSRNQFSGLIPSSIANISTLRQLDLSLNNLSGEIPVSFDSQRSLNLFNVSYNDLSGSVPRLLARKFNSSSFVGNIQLCGYSSSTLCPSQAPSEGVTAPPPGLSKHHHHRKLSTKDVILIVAGVLLIILIILCCVLLFCLIRKGSTSKAENGRAAATAVSMRTEKGVPPVAAGDVEAGGEAGGKLVHFDGPIAFTADDLLCATAEIMGKSTYGTVYKAILEDGSQVAVKRLREKITKGQREFESEVSVLGKIRHPNVLALRAYYLGPKGEKLLVFYYMPRGSLASFLHGGGTEKSIDWPTRMKIAQDIASGLFYLHSQENIIHGNLTSSNVLLDENTTAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDIYSLGVILLELLTRKSPGVSMNGVNLPQWVASIVKEEWTNEVFDADLMRDASTVGDELLNTLKLALHCVDPSPSARPEVHQVLQQLEEIRSERSVTASPGDDSYTI 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02252 895 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 374 493 - -
Pste7g02252 895 SUPERFAMILY Protein kinase-like (PK-like) 611 880 IPR011009 -
Pste7g02252 895 Gene3D Phosphorylase Kinase; domain 1 613 684 - -
Pste7g02252 895 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 316 878 - -
Pste7g02252 895 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 111 296 - -
Pste7g02252 895 Pfam Leucine Rich repeats (2 copies) 203 243 IPR025875 -
Pste7g02252 895 CDD STKc_IRAK 613 878 - -
Pste7g02252 895 Pfam Leucine rich repeat 401 461 IPR001611 GO:0005515
Pste7g02252 895 Pfam Leucine rich repeat 306 364 IPR001611 GO:0005515
Pste7g02252 895 Pfam Leucine rich repeat N-terminal domain 115 152 IPR013210 -
Pste7g02252 895 FunFam Pollen receptor-like kinase 1 684 888 - -
Pste7g02252 895 ProSiteProfiles Protein kinase domain profile. 607 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g02252 895 FunFam Leucine-rich repeat receptor-like protein kinase 592 683 - -
Pste7g02252 895 SUPERFAMILY L domain-like 146 491 - -
Pste7g02252 895 Gene3D Ribonuclease Inhibitor 369 495 IPR032675 -
Pste7g02252 895 Pfam Protein tyrosine and serine/threonine kinase 610 875 IPR001245 GO:0004672|GO:0006468
Pste7g02252 895 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 306 373 - -
Pste7g02252 895 Gene3D Ribonuclease Inhibitor 113 269 IPR032675 -
Pste7g02252 895 Gene3D Ribonuclease Inhibitor 270 368 IPR032675 -
Pste7g02252 895 SMART LRR_typ_2 400 423 IPR003591 -
Pste7g02252 895 SMART LRR_typ_2 352 375 IPR003591 -
Pste7g02252 895 SMART LRR_typ_2 276 298 IPR003591 -
Pste7g02252 895 SMART LRR_typ_2 202 226 IPR003591 -
Pste7g02252 895 SMART LRR_typ_2 178 201 IPR003591 -
Pste7g02252 895 Gene3D Transferase(Phosphotransferase) domain 1 685 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02252 Pste-Chr7 20854724 20857677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02252 106 879 Receptor kinase-like Gene Family AT3G51740 61.727 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste7g02252 PK_Tyr_Ser-Thr 6e-43 CL0016