Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02246 ATGAGCTTTCAGGACATCGAGGCTGGGCGACCCTTGGGCTCGCGACGAGGGTTGATCAATGGGAAGCAGGACCCCACGCAAGCGGTGGCCGCCGGAATATTCCAGATCAACACCGCCGTGTCCACCTTTCAGCGACTCGTCAACACCCTCGGAACCCCCAAAGACACCCCTGACCTACGCGAGAAGCTGTTAGAACAGGACATTCTGTGTAATAGGGCATGTGATGATTTCCCCCTCCATAAGACTAGACTACATATTGGGCAATTGGTGAAGGATACATCCGCCAAACTTAAGCAAGCCAGTGACATTGATCACCATGCAGAAGTTAATGCAAGCAAGAAGATCGCAGATGCTAAACTTGCGAAAGATTTTCAGGCGGTGTTGAAAGAGTTTCAGAAGGCACAGCGTCTTGCAGCTGAAAGGGAAACAGCATACACTCCTTTTGTCCCACAAGCAGTCCTTCCTTCAAGCTATACAGCTAGTGAAATAGATGTTGGTTCTGATAAGTCACCAGAGCAGCGTACCCTACTTGTGGAATCAAGGAGGCAGGAGGTTTTATTCTTAGATAATGAGATTGCCTTTAATGAGGCTATCATCGAGGAAAGGGAGCAAGGCATTCAAGAAATACAGCAGCAAATCGGTGAAGTTAATGAGATCTTCAAAGATCTTGCTGTTCTTGTCCATGAGCAAGGAACCATGATTGATGATATTGGCTCCAACATTGAGAACTCCCATGCAGCAACTGCACAAGCAAAATCTCAACTTGCAAAAGCTGCAAAAACCCAAAGATCAAATTCCTCTTTGACATGCTTGCTTTTGGTGATTTTTGGGATTGTGCTTCTCATCGTGATCATAGTTCTTGCTGCTTAATCGAAGATTGTCTAAATTCCATTACGAAGTAAATGCATAATTCCCATAACGAAGTATACAGAGCAGCTGATAGCATCTCCCTTGCTGAAGATGTAACTAGATTGATGTTTTGCCGGGTCTGGTGGTTGACCAGAGATTGTTGCATCTGATTTCGGTACAAGTGAGAATTCCCATAATTTTGTTGTGGGGTGTTATGTTCTCTCTATGTTAGTGTTTGGGGTTTTAAAACGTGTCACGAATTATGCTGTAAGTTTTCTCCTTGTTCCTTTAATTAAAAATATTAATTCTTTGATTTTCCTTTACTTGTAAATGCAACACTATGGCTGGCTGTACTGACTCTTTAGCCAAACCTTCATATATGGTAATCTGTTGCTGTTTGTTTTA 1254 0.4338 MSFQDIEAGRPLGSRRGLINGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTPDLREKLLEQDILCNRACDDFPLHKTRLHIGQLVKDTSAKLKQASDIDHHAEVNASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTASEIDVGSDKSPEQRTLLVESRRQEVLFLDNEIAFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGTMIDDIGSNIENSHAATAQAKSQLAKAAKTQRSNSSLTCLLLVIFGIVLLIVIIVLAA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02246 289 CDD SNARE_Qa 216 257 - -
Pste7g02246 289 FunFam Syntaxin-22 like 20 149 - -
Pste7g02246 289 SMART SynN_4 15 143 IPR006011 GO:0016020
Pste7g02246 289 CDD SynN 23 164 IPR006011 GO:0016020
Pste7g02246 289 Gene3D - 190 289 - -
Pste7g02246 289 FunFam Syntaxin-22 like 189 289 - -
Pste7g02246 289 Gene3D - 20 149 - -
Pste7g02246 289 PANTHER SYNTAXIN 26 281 IPR045242 -
Pste7g02246 289 ProSitePatterns Syntaxin / epimorphin family signature. 202 241 IPR006012 GO:0005484|GO:0006886|GO:0016020
Pste7g02246 289 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 196 258 IPR000727 -
Pste7g02246 289 Pfam Syntaxin-like protein 79 145 IPR006011 GO:0016020
Pste7g02246 289 Pfam Syntaxin-like protein 30 64 IPR006011 GO:0016020
Pste7g02246 289 SMART tSNARE_6 191 258 IPR000727 -
Pste7g02246 289 Pfam SNARE domain 232 284 IPR000727 -
Pste7g02246 289 SUPERFAMILY t-snare proteins 23 251 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02246 Pste-Chr7 20798276 20804680 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02246 1 277 SNARE and Associated Proteins AT5G46860 73.646 1.11e-143 403