Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02238 AAGAGAAGGAAATTATAGAAACAGTGAACGGCGCAGGCCGGGAGTGAGGAGTGAGGAGTGAGGAGACATGGATTCTGACGACTTCCCCAACAAAGCGTTAACCAGCACGCGTTTTTCCGACTTGAATCCGCCGCTCTCTGATCCCGTTCTCCAAGTCCTTTCACAGTCCGGCTTCCACTTCTGCACCCCCGTCCAAGCCGCCACTATCCCTTTGCTTTGCACCTTCAAGGACGTCGCTGTTGACGCCGCCACCGGTTCTGGCAAAACCCTAGCTTTTCTCGTTCCTCTCGTCGAGATTCTACGCCGCTCCTCCTCTCATCCCAAGCCTCACCAGATATTAGGAATAATTATATCCCCTACAAGGGAGCTATCAACCCAAATATATCACGTTGCACAACCTTTCATTGCGACATTGATTAATGTTAAGTCCATGCTCCTCGTTGGTGGAGTGGAAGTAAAAGCAGACATAAAGAAAATAGAGGAGGAAGGAGCAAACATATTGATTGGTACCCCTGGGAGGCTATATGACATAATGAATCGGATGGATGTCTTGGATTTCAAAAACTTTGAGATTTTGATTTTGGATGAAGCTGACAGACTCTTAGATATGGGATTCCAGAAGCAGATAACTTCTATAATATCTCTCTTGCCTAAGCTTCGTAGAACTGGCCTCTTTTCTGCTACTCAAACAGAGGCTATTGAAGAGCTTGCTAAGGCAGGATTGAGGAATCCTGTGAGGGTAGAAGTCCGAGCAGAAACAAAATCAGAAAATGGTCCTGCATCATCAAAACAACTGGAATCTTCCAAAACACCTTCAGGACTTCACATTGAGTACATGGAATGCGAGGCAGATAAGAAGCCATCACAGCTAGTAGATCTCCTTATTAAGAATCGCTCTAAAAAAATTATAATATATTTCATGACTTGTGCTTGTGTTGATTATTGGGGAGCTGTTCTTCCTTGCCTTTCTGTTTTGAAAGGCTTCTCCTTGATTCCCCTTCATGGAAAGATGAAGCAGTCTGCCAGGGAGAAAGCACTAGCTTCATTTACATCCCTTACAAATGGATTTCTTCTATGTACGGATGTTGCAGCACGTGGACTTGACATACCAGGTGTAGATTGTATAGTGCAGTATGATCCTCCTCAAGATCCAAATGTTTTTGTGCATAGAGTAGGTCGAACTGCTCGTCTGGGTAAACAAGGCCATGCCGTTGTCTTCTTATTACCAAAGGAGGAGTCTTACGTAGAATTCCTGCGAATAAGAAGAGTTCCTCTTCAAGAGAGAACATGTTCTGATGATGCATTTGATGTTGTTCCTCAGATTCGTTATGCTGCAAAAAAAGATCGTGACGTCATGGAAAAAGGAATCAAGGCTTTTGTCTCTTACATTCGTGCTTATAAAGAGCATCAATGCTCCTATATATTTAGGTGGAAAGAACTTGAAATTGGCAAATTGGCCATGGGATATGGCTTATTGCAACTTCCTTCAATGCCAGAGGTAAAACACCACTCACTCTCTACTGATGGATTTGAACCAGTTGAAGATGTTAATTTGGAGGACATTAAGTACAGGGATAAATCACGGGAGAAACAAAGGAAGAAGAACCTGCAAGCGAAGAAAGAAGCCAAAGAGAAAGAGCCAAAACTTCTAAAACCAAACAAAACCTCAAATGTACCCACTGTCATGCGGAAGAAAACAGCTCGACAGAGACGTGCTCAGCAGACAATGGAAGACGAGGAAGAGTTGATGCAAGAATACCGCTTGTTGAAGAAATTGAAGAAAGGGACCATAGACGAGGATGAATATGCCAAATTGACAGGCAGCGAGGATTTACTTTGAAAGCAAAGTATGAATCCCTGACGATACTGTTGTGGATATCATGATCGGTGCTGTAAAGGTATTCAGTAAGGATGGGGGTTCCAAACCCCACAATTTTGGTTAGTAAATTACGACATCCCTGCCATGTGGTTCTGTTACCATTCTTTTAAATAACTAAAGATAAATACATCTTTCACTAGAGTTTGAAGAGTTCCAAGGATCAAAATCCATTTGGCTGCTGCTACAGCACTTAAAGCGTTGGACAATGAACTGAATTATATTTACAGATTGTTATAGAGACAAAATGTTGACAGTGCAGAGATATGTGGAATGGTACAATTTCTAGAATGAGAGAAAGTCTTCATTTGGATCAGGTTATGAACAGCATGAAGATTAATATCATCCAAAATTGTTTGCTCCAATTAGTCTTTACAGACATTCATCATGTGATTTTGATAAGTAATGGTAGATTTGCCGGAGCATCAAAGTAGAATTATGTTTTAGGTGTTTGTAAGATTAATAAACATATTGAAGAATATTGTCGTGTACTCGATACTGAATGTTAATGTATCAAGGTGGTGGGGAACGTCATTTTTTCTTTCCAGCCTTGAGGGAAGGTAGTTCTGCCCATGAAAG 2455 0.4159 MDSDDFPNKALTSTRFSDLNPPLSDPVLQVLSQSGFHFCTPVQAATIPLLCTFKDVAVDAATGSGKTLAFLVPLVEILRRSSSHPKPHQILGIIISPTRELSTQIYHVAQPFIATLINVKSMLLVGGVEVKADIKKIEEEGANILIGTPGRLYDIMNRMDVLDFKNFEILILDEADRLLDMGFQKQITSIISLLPKLRRTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSENGPASSKQLESSKTPSGLHIEYMECEADKKPSQLVDLLIKNRSKKIIIYFMTCACVDYWGAVLPCLSVLKGFSLIPLHGKMKQSAREKALASFTSLTNGFLLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVHRVGRTARLGKQGHAVVFLLPKEESYVEFLRIRRVPLQERTCSDDAFDVVPQIRYAAKKDRDVMEKGIKAFVSYIRAYKEHQCSYIFRWKELEIGKLAMGYGLLQLPSMPEVKHHSLSTDGFEPVEDVNLEDIKYRDKSREKQRKKNLQAKKEAKEKEPKLLKPNKTSNVPTVMRKKTARQRRAQQTMEDEEELMQEYRLLKKLKKGTIDEDEYAKLTGSEDLL 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02238 590 Coils Coil 540 570 - -
Pste7g02238 590 SMART ultradead3 35 255 IPR014001 -
Pste7g02238 590 Gene3D - 3 228 IPR027417 -
Pste7g02238 590 MobiDBLite consensus disorder prediction 500 558 - -
Pste7g02238 590 Pfam Domain of unknown function (DUF4217) 418 475 IPR025313 -
Pste7g02238 590 Pfam DEAD/DEAH box helicase 40 213 IPR011545 GO:0003676|GO:0005524
Pste7g02238 590 CDD SF2_C_DEAD 255 385 - -
Pste7g02238 590 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 395 IPR027417 -
Pste7g02238 590 MobiDBLite consensus disorder prediction 229 248 - -
Pste7g02238 590 MobiDBLite consensus disorder prediction 500 529 - -
Pste7g02238 590 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 171 179 IPR000629 -
Pste7g02238 590 PANTHER RNA HELICASE 12 516 - -
Pste7g02238 590 SMART DUF4217_3 414 477 IPR025313 -
Pste7g02238 590 CDD DEADc_DDX55 27 225 - -
Pste7g02238 590 SMART helicmild6 294 376 IPR001650 -
Pste7g02238 590 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 267 423 IPR001650 -
Pste7g02238 590 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 47 225 IPR014001 -
Pste7g02238 590 Pfam Helicase conserved C-terminal domain 264 376 IPR001650 -
Pste7g02238 590 MobiDBLite consensus disorder prediction 233 248 - -
Pste7g02238 590 FunFam RNA helicase 10 228 - -
Pste7g02238 590 Gene3D - 254 489 IPR027417 -
Pste7g02238 590 Coils Coil 504 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02238 Pste-Chr7 20729875 20737222 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02238 14 385 Eukaryotic Initiation Factors Gene Family AT3G19760 28.954 1.13e-42 156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02238 7 20729875 20737222 Pste7g02238 7 20729875 20737222 ECH