Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02215 ATGAAGGGCTACATATTTATGAGCGAGGATAGAGTACAGAGAGAGCAACAACAACACAAGAAAGTGGATGTGAGAAACATGAAAGGTCATGAGCCCCGTTCAAGCTCTTCATGTGCTGCTTGCAAGTTATTGAAGAGAAGATGCATACCCAATTGTATTTTTGCATCTTACTTTCGGTCTGATGAGTGTAAGAAATTTGCAAAGGTGCATAAGGTATTTGGTGCCAGCAATGTGAGAAGGATCTTGATTGAAGTACCGGAAGAGCAGAGAGAAGACACAGTGAATTCTTTGGCTTATGAAGCTGAGGCAAGGCTGAGAGACCCGGTTTATGGATGTATTGGTATCATAGCTGTTTTGCAAAGGAAGATGGAGGAGCTCCAACATGATTTGGCCATCGCTAAGGATCGTCTTGCGCACTGTCATGCTGCTATCCTTTCTCCTGATATCTTGCATCTCCATGTCCGCTTCCCTTCATTCCCTGACTTTTGCACTTCTTCCACTGATTTCAATGATATCTTCCGCCACACTTCTTCCTCTCAATTACATGAAACCATGGATGATTTCAATCAAATCCCCTATATGTTTTAA 588 0.4252 MKGYIFMSEDRVQREQQQHKKVDVRNMKGHEPRSSSSCAACKLLKRRCIPNCIFASYFRSDECKKFAKVHKVFGASNVRRILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGIIAVLQRKMEELQHDLAIAKDRLAHCHAAILSPDILHLHVRFPSFPDFCTSSTDFNDIFRHTSSSQLHETMDDFNQIPYMF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02215 195 Coils Coil 116 136 - -
Pste7g02215 195 Pfam Lateral organ boundaries (LOB) domain 37 134 IPR004883 -
Pste7g02215 195 ProSiteProfiles LOB domain profile. 36 137 IPR004883 -
Pste7g02215 195 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 35 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02215 Pste-Chr7 20529910 20530497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02215 27 194 AS2 family AT3G11090 57.059 7.14e-63 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste7g02215 LOB 8.6e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02215 7 20529910 20530497 Pste7g02215 7 20529910 20530497 ECH