Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02214 TGACAGTCAGGTACAACCAAAATCGATTTTCATTTTGACCAATGAAAGGGTATTGCTTATCACACCAGTCACCATCAAGATAAGAAGAGATAGACCATTATTATTGCAGCAAACAGTAACTAGGGATGGGAGATAAAAGGCTCAGAAATCATGGGAGAAACTTTAGAATGGTTTCCGTTGTGACTATGGAAAATTGCTATGATTCTTGCTGGCACATGGGCACCAGCTGGGCTCAATGCAGCGATCATTCTTCTTCTTTTGCAGTACCAACACAAATACTGCCTCATGTCACTGACTGTACCTCTCTTCAATTTGGTGAGTTTCACTCATGGCCACTTCCCATAGAAGGGGCTGCAGAAGAGAGAGCAATAAGTGCTTCCAAGAGTCACAGTCAGGCGGAGAAAAGGCGTCGAGACAGGATCAATGCACAGCTTGCAACTCTCAGAAAACTTATTCCCAAGTCTGATAAGATGGACAAGGCAGCCTTACTAGGGAGTGTAATAGACCAAGTAAAAGATCTAAAGCGAAAAGCCATGGATGTTAGCAGGGCCTTCACAGTTCCAACTGAAATTGATGAAGTATCAATCGACTATGACCGTGTTCAAGATGAAAGCTGCACCAAAGTCAACAAATTGAAGGACAATATTGTGATCAAAGCTTCTGTTTGCTGCGAAGATCGACCAGAACTGTTCCCTGAACTCATCCAAGTCCTTAAAGGCTTGAGACTCACAGCAGTTAAAGCTGACATAGCCAGTGTTGGTGGCAGGATCAAAAGCATATTGGTGCTTTGTTCTAAGGATAGTGAAGAGAGTGTTTGCCTCACCACTCTCAAACAGTCCCTCAAATCTGCGGTGACCAAAATTGCTTCATCATCCATGACATCTAGTTGTCCCACTAGAAGTAAGAGGCAGAGATTTTTCTTGCCTTCTCATTGCCTACAGTAATTTATTAATTGCAAAATTATCCCCCCTATTTTTCTTAGGAGGGTCATTTAAGTGGGGCAATTATTTGCTTTGTTTTTCAATATTTATATACCTATAAGATATATAGTTTCTCCATCATGA 1064 0.4154 MGDKRLRNHGRNFRMVSVVTMENCYDSCWHMGTSWAQCSDHSSSFAVPTQILPHVTDCTSLQFGEFHSWPLPIEGAAEERAISASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIDQVKDLKRKAMDVSRAFTVPTEIDEVSIDYDRVQDESCTKVNKLKDNIVIKASVCCEDRPELFPELIQVLKGLRLTAVKADIASVGGRIKSILVLCSKDSEESVCLTTLKQSLKSAVTKIASSSMTSSCPTRSKRQRFFLPSHCLQ 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02214 272 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 83 132 IPR011598 GO:0046983
Pste7g02214 272 CDD bHLH_AtAIG1_like 78 157 - -
Pste7g02214 272 Gene3D - 77 141 IPR036638 GO:0046983
Pste7g02214 272 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 86 135 IPR036638 GO:0046983
Pste7g02214 272 PANTHER TRANSCRIPTION FACTOR BHLH30 75 268 IPR045847 GO:0003700|GO:0006355
Pste7g02214 272 CDD ACT_UUR-ACR-like 179 214 - -
Pste7g02214 272 SMART finulus 89 138 IPR011598 GO:0046983
Pste7g02214 272 Pfam Helix-loop-helix DNA-binding domain 86 132 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02214 Pste-Chr7 20497967 20499363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02214 21 269 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 42.803 1.21e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste7g02214 HLH 2.8e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02214 7 20497967 20499363 Pste7g02214 7 20497967 20499363 ECH
Pste7g02214 7 20497967 20499363 Pste8g01166 8 6140241 6141906 PCT