Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02209 CTATATACCCATCCTTACGGCCGCAGCACATAGTTAGGGTTTTGGCTTGAGCTCTGCCAGATCTTTATTTGTCTACTTCAAAAGATGAGTAAGCTTCAGAGTGATGCTTTGAGAGAAGCCATCTCTGGAATCATGACCGATTCCAAGGAGAAGAATCGCAACTTTGTGGAGACCATTGAACTCCAAATTGGGTTGAAAAACTACGATCCACAGAAGGATAAGCGTTTCAGTGGCTCTGTCAAGTTGCCCCACATCCCTCGCCCCAAGATGAAAATTTGCATGCTTGGTGATGCTCAACATGTTGAAGAGGCAGAGAAGATAGGGTTGGACTACATGGACGTGGAAGCCTTGAAGAAGCTAAACAAAAATAAGAAGTTGGTGAAGAAACTAGCCAAAAAGTACCATGCCTTCTTAGCTTCTGAAGCAGTTATTAAGCAGATTCCTCGTCTTTTGGGTCCTGGTCTCAACAAGGCAGGCATGTCTTGGAAGTTCCCTACACTTGTTACTCACCAAGAATCTCTTGAGTCTAAGGTTAATGAGACCAAGGCCATGGTCAAGTTTCAACTTAAGAAGGTGCTCTGTATGGGAGTAGCAGTGGGCAATGTTAGTATGGAGGAAAAGCAAATCTTCCAAAATGTACAACTGAGTGTTAACTTCCTGGTATCCTTGTTGAAAAAGAATTGGCAGAATGTCCTCTCCTTCAATGCTCTGCTTATGGTTTCTATTATTGTAATATTCATTCTGGTGGTCGAGCCAGGCAATCATCATCTAATGTAAGTTTTTGTTGATTTCAGGTTAGGTGCTTGTATCTTAAGAGTACCATGGGCAAGTCTTACCGTGTCTTTTGACGGATTTCTTTTTTTAATTTGGTGAATTTGTGTTCGCTCGTAATATATTGATTATCTTAATAGCTAGATACAAATTTTCATCTTGTTACAGTGTTGTGGGAAGGACTTTTCTGGTTAGTGTTCAGAGTTCATGTTCAAACATATGGTATGCGTTATTTTTGCGGCTGCTTCCGTATTTACGTGTTAATGCCTAATTGCTTTAACTACTCGCTTAATGTAGCTCATAAATCCGTGTATTCTATTTGTCTCAAATTTAGTGAACAGCCCAGTCTGACAAAGCTTTTAATTTGAGACATGCTATACTTTTTTTTGCAAAAGTGATAGTTTATATACAACAGG 1187 0.3993 MSKLQSDALREAISGIMTDSKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGMSWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQLSVNFLVSLLKKNWQNVLSFNALLMVSIIVIFILVVEPGNHHLM 230
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02209 230 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 1 208 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Pste7g02209 230 FunFam Ribosomal protein 140 213 - -
Pste7g02209 230 Pfam Ribosomal protein L1p/L10e family 22 206 IPR028364 -
Pste7g02209 230 SUPERFAMILY Ribosomal protein L1 3 206 IPR023674 -
Pste7g02209 230 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 11 194 - -
Pste7g02209 230 FunFam Ribosomal protein 65 157 - -
Pste7g02209 230 Gene3D - 21 205 - -
Pste7g02209 230 FunFam Ribosomal protein L10a 1 119 - -
Pste7g02209 230 CDD Ribosomal_L1 9 203 IPR028364 -
Pste7g02209 230 Gene3D - 65 157 IPR016095 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste7g02209 Pste-Chr7 20453189 20455554 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02209 1 203 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 89.163 1.48e-116 330