Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02200 TTTAACCGTAAGAACCAAATGCAGATACTATCGTTCTGTTCAACCAATTAAACTAGATCTTCTTAACTAGTTTCCTGGAAACCAATACATGTCGGTCCCAGGAGCATTCTCGGGCCTCTCCGCCGGAGAAAAGAAGGGCCCGCCGGCGACCGTGGCGGAGCGAAAGGTTCCAATTCTCAAGCTTTTCTCCTTTGCCGACTTCTATGATTGTGTTCTCATGGCCGTTGGATCCATTGGGGCGTGTGTTCATGGTGCCTCTGTGCCTGTTTTCTTTGTCTTCTTTGGAAAGATCATCAATGTCATAGGGCTTGCTTATCTTTTTCCCAAAGAAGCTTCTCACGAAGTTGCTAAGTATGCGTTGGATTTTGTGTATCTAAGCATAGCAATATTGTTTTCATCGTGGACAGAGGTGGCTTGTTGGATGCACACTGGGGAACGCCAAGCTGCAAAAATGAGAATGGCATACTTAAGGTCAATGTTGAATCAAGATATAAGTCTTTTTGATACAGAGGCATCAACTGGAGAAGTTATTTCTTCTATTACAAGTGACATTGTCGTTGTTCAAGAGGCACTCTCTGAGAAGGTTGGGAACTTCATGCACTACATAAGCCGTTTTATCGCAGGTTTTACCATTGGTTTTGTGAGAGTGTGGCAGATTAGTTTAGTGACACTTGCCATTGTGCCCTTAATTGCCCTAGCTGGAGGGGAAGAAAGAGCACTGAGATCATACAAAAGTGCTCTGACCAACACATATAGAAATGGTAAAAAAGCAGGTTTAGCAAAGGGTCTGGGACTAGGCTCCATGCATTGTGTGCTTTTCCTCTCATGGGCACTGCTTGTTTGGTCACTTGGGCAAGCAGCACCAGATATTTCAGCATTTATCAGAGCAAAAGCAGCAGCTTATCCAATTTTTGAGATGATAGACAGGGACACAATGAGCAAAGCCAGCTCAGAAAATGGTCAAAAGTTAAGCAAATTGGAAGGTCACATCCAATTCATGGATGTCTGTTTCAGTTATCCATCTCGTCCTGATGTGGTTATTTTCAACAATTTTTGTCTTGAGATTCCGCCAGGGAAAATTTTAGCTCTTGTGGGAGGAAGTGGTTCTGGAAAGAGCACAGTTATATCATTGATTGAGCGTTTCTATGAACCACTTTCTGGTCAAATACTATTAGATGGGAACAATATCAAGGAACTTGATCTCAAATGGCTTAGACAGCAAATTGGACTGGTTAATCAAGAACCTGCACTTTTTGCCACAAGCATTAGGGAGAACATACTCTATGGAAATGATCATGCCACTCTTGAAGAAATAAATCAAGCTGTTGGTGAGAGAGGGATACAACTATCAGGGGGACAAAAACAAAGGATTGCAATATCTCGTGCTATAGTTAAGAATCCATCAATCCTTTTATTAGATGAAGCTACCAGTTCTCTTGATGCAGAGTCTGAGAAAAGTGTACAGGAGGCTCTTGATCGTGTCATGGTTGGTAGAACAACTGTGATATTAGCACACAGACTTTCTACCATTAGGAATGCAGATATGATTGCTGTTATTGAGGAAGGGAAGGTGGTGGAAATTGGAAATCATGAGGAACTCATGTCCAATCCAAGTAATGTTTATGCATCTCTTGTTCAAATCCAAGAAACAGCCTTTCCTCAGGGCCAACCTTCTGCTGATCCTTACTTGGGAGGGCGCTTAGGCGATTCATCATCCCATGGAGCAAGCTTTCGAGGTAGTTTCCATTCAGATAAAGAATCAACTAGCAGGGCTTTTGGTGATGGAGCAGAAAGTTTTGAAAGTTCAAGGCATGTATCAGCAAAAAGCTTGTATTCCATGATTGGTCCTGATTGGCTTTATGGTGTTTTTGGAACCTTGGGTGCATTTATTGCTGGAGCACAGATGCCACTTTTTGCTCTTGGAATCTCTCATGCTCTTGTATCTTATTACATGGATTGGGATACAACACGCCATGAAGTGAAAAAAGTTGCTCTCCTCTTCTCCATTTTGAAGAGTGAAATTGCCTGGTTTGATGACATGAACAACACAAGTTCTATGCTTTCCTCACGTTTAGAGACTGATGCAACATTGTTAAGAACTGTAATTGTTGATCGTTCAACAATTCTTCTGCAGAACGTTGGTCTAGTTGTTGCTTCATTTATAATTGCCTTCATGTTGAACTGGAGAATAACACTGAAACTATTCATGCAAGGCTTTGGTGGCAACCTGAGCAAAGCATATCTAAAAGCAAACATGTTGGCTGGGGAGGCTGTGAGTAATATCCGAACTGTGGCTGCATTTTGTGCTGAGAAAAAGGTCCTTGACCTTTATGCTAATGAGCTTGTGGAACCTTCCAAACGTTCTTTCAATCGAGGCCAAATTGCTGGCATATTCTATGGCATTTCCCAGTATGGATCTGTGTTGATGGAAAAGGAGCTCTCTAGCTTCAAATCAATTATGAAGTCATTTATGGTTTTAATTGTAACAGCACTGGCTATGGGGGAGACTTTGGCACTTGCACCTGACCTTTTGAAAGGAAATCAAATGGTTGCATCAATTTTTGAAGTGATGGATAGGAAGACAGGAATATTGGGTGATGTTGGAGAAGAACTGAAGACAGTGGATGGAAAAATTGAGCTAAAAGGAATCCATTTCAGTTACCCTTCTAGGCCAGATGTGGTTATTTTCAATGATTTAAATCTTACAGTGCCTGCAGGAAAGAATATTGCCTTGGTGGGGCATAGTGGTTGTGGAAAAGACATCAAGAAACTTAACTTGAAATCCCTTAGGAAACACATTGGTCTAGTGCAACAAGAACCAGCTCTTTTTGCAACATCAATTTATGAAAACATTCTATATGGTAAGGAAGAAGCCACAGAAGCAGAAGTGATTGAAGCAGCAAAACATGCCAACGCTCATAGCTTCATCAGTGCTCTTCCTGAGGGCTACTCCACAAAAGTTGGTGAGAGAGGAGTTCAACTATCTGGTGGCCAGAAACAAAGGGTGGCTATTGCAAGGGCTGTTCTGAAAAACCCTGAAGTTTTGCTGCTGGATGAAGCCACCAGTGCACTGGATTTGGAGTCTGAGCGTGTGGTGCAACAAGCTCTAGACAAATTGATGCAGAACAGAACAACATTTATAGTGGCACATAGGCTATCCACAATAACAAATGCAGACCAAATAGTAGTTTTAGAAGATGGAAAGATAATTGAAAGAGGGACTCATGCAAGACTTGTACAGAACACAGATGGAGCATACTACAAATTAATTAGCCTTCAACAGCATGTACAAGAACATATTGATTGACATAATAACAAAGATCAATGCATTCTTTCATCCAAGACCAATTTGGATTTTTTAGATTTTCACCTTTCTCTATGTAAAAGGTTTGTTTGTTTGCGTTTTTACCATCACACTTATAAAGAATGATGTGGATTGGGGGATGGAAATATGTTGGTAACTATTGTAAAGATATATACTCGCTTTAAATAATG 3495 0.4103 MSVPGAFSGLSAGEKKGPPATVAERKVPILKLFSFADFYDCVLMAVGSIGACVHGASVPVFFVFFGKIINVIGLAYLFPKEASHEVAKYALDFVYLSIAILFSSWTEVACWMHTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISSITSDIVVVQEALSEKVGNFMHYISRFIAGFTIGFVRVWQISLVTLAIVPLIALAGGEERALRSYKSALTNTYRNGKKAGLAKGLGLGSMHCVLFLSWALLVWSLGQAAPDISAFIRAKAAAYPIFEMIDRDTMSKASSENGQKLSKLEGHIQFMDVCFSYPSRPDVVIFNNFCLEIPPGKILALVGGSGSGKSTVISLIERFYEPLSGQILLDGNNIKELDLKWLRQQIGLVNQEPALFATSIRENILYGNDHATLEEINQAVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSSLDAESEKSVQEALDRVMVGRTTVILAHRLSTIRNADMIAVIEEGKVVEIGNHEELMSNPSNVYASLVQIQETAFPQGQPSADPYLGGRLGDSSSHGASFRGSFHSDKESTSRAFGDGAESFESSRHVSAKSLYSMIGPDWLYGVFGTLGAFIAGAQMPLFALGISHALVSYYMDWDTTRHEVKKVALLFSILKSEIAWFDDMNNTSSMLSSRLETDATLLRTVIVDRSTILLQNVGLVVASFIIAFMLNWRITLKLFMQGFGGNLSKAYLKANMLAGEAVSNIRTVAAFCAEKKVLDLYANELVEPSKRSFNRGQIAGIFYGISQYGSVLMEKELSSFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQMVASIFEVMDRKTGILGDVGEELKTVDGKIELKGIHFSYPSRPDVVIFNDLNLTVPAGKNIALVGHSGCGKDIKKLNLKSLRKHIGLVQQEPALFATSIYENILYGKEEATEAEVIEAAKHANAHSFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEVLLLDEATSALDLESERVVQQALDKLMQNRTTFIVAHRLSTITNADQIVVLEDGKIIERGTHARLVQNTDGAYYKLISLQQHVQEHID 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02200 1072 Gene3D - 839 890 IPR027417 -
Pste7g02200 1072 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 45 205 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g02200 1072 Gene3D ABC transporter type 1, transmembrane domain 23 206 IPR036640 GO:0005524|GO:0016020
Pste7g02200 1072 FunFam ABC transporter B family member 28 889 1066 - -
Pste7g02200 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 291 519 IPR027417 -
Pste7g02200 1072 FunFam ABC multidrug transporter mdr4 299 521 - -
Pste7g02200 1072 Pfam ABC transporter transmembrane region 635 704 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g02200 1072 Pfam ABC transporter transmembrane region 49 204 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g02200 1072 Pfam ABC transporter transmembrane region 713 775 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g02200 1072 Gene3D ABC transporter type 1, transmembrane domain 244 637 IPR036640 GO:0005524|GO:0016020
Pste7g02200 1072 SMART AAA_5 876 1039 IPR003593 GO:0016887
Pste7g02200 1072 SMART AAA_5 328 502 IPR003593 GO:0016887
Pste7g02200 1072 CDD ABC_MTABC3_MDL1_MDL2 849 1064 - -
Pste7g02200 1072 ProSitePatterns ABC transporters family signature. 420 434 IPR017871 GO:0005524|GO:0016887
Pste7g02200 1072 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 301 517 IPR003439 GO:0005524
Pste7g02200 1072 Gene3D - 891 1065 IPR027417 -
Pste7g02200 1072 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 849 1062 IPR003439 GO:0005524
Pste7g02200 1072 SUPERFAMILY ABC transporter transmembrane region 31 256 IPR036640 GO:0005524|GO:0016020
Pste7g02200 1072 CDD ABC_MTABC3_MDL1_MDL2 301 519 - -
Pste7g02200 1072 Gene3D ABC transporter type 1, transmembrane domain 638 818 IPR036640 GO:0005524|GO:0016020
Pste7g02200 1072 Pfam ABC transporter 889 993 IPR003439 GO:0005524
Pste7g02200 1072 ProSitePatterns ABC transporters family signature. 965 979 IPR017871 GO:0005524|GO:0016887
Pste7g02200 1072 SUPERFAMILY ABC transporter transmembrane region 579 830 IPR036640 GO:0005524|GO:0016020
Pste7g02200 1072 PANTHER ABC TRANSPORTER B FAMILY 204 640 IPR039421 -
Pste7g02200 1072 MobiDBLite consensus disorder prediction 540 565 - -
Pste7g02200 1072 CDD ABC_6TM_Pgp_ABCB1_D1_like 44 274 - -
Pste7g02200 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 843 1064 IPR027417 -
Pste7g02200 1072 CDD ABC_6TM_Pgp_ABCB1_D2_like 582 834 - -
Pste7g02200 1072 Gene3D - 299 546 IPR027417 -
Pste7g02200 1072 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 639 774 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste7g02200 1072 Pfam ABC transporter 320 448 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02200 Pste-Chr7 20335745 20360191 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02200 13 1071 Calmodulin-binding Proteins AT2G36910 44.976 0.0 1003