Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02198 ATGGTTAGGCCACCATCCTGTAACGAGAGTGGTGTGAAGAAAGGGCCATGGACACCAGAAGAAGATGAAAAGCTAAAGAGTTATGTTAGCAAACATGGAAAGGGAACGTGGAGAACTCTTCCAAAACATGCAGGTCTAAATAGGTGTGGAAAAAGCTGCAGGTTAAGGTGGGAAAACTATCTGAGACCTGATATTAAGAGAGGGAGATTCACTGATGAAGAGGAGCAATTGATCTTCAACCTTCATTCAGTTCTTGGAAACAAGTGGGCAAAGATTGCTACCCATCTTCCAAGAAGAACTGATAACGATATAAAGAATCATTGGAACACTAACCTAAGAAAAAAGCTTCTCCAAATGGGTATTGACCCAGAAACTCATAAGCCAAGAACTGACTTCAATTACCTTATGAATCTTTCCCATTTGCTTGGCATGTCAAATTTGGGCACATCTACAAGTCCTTGGGCCAACCCTTATGTTAATCAATTTGCCAAACTACAATTGGTACAAAACATGTTACAACTTATCAACAACAACTCTTCATTGGTTAACATGGGTAATCCTAATTATAACCTCTTAGGCAATCAAATTCTCAACCCACTTGATACATTTCTCAATGGGACAAACCTCCAAAATAAAGATTCAATCTTGACAAGTCAAGAATATGCAAACCCTAATGGTATCAATAATAATTCTTGTATGTTGATGTCTCAAACATGCAGTGACTCTTCCCGACAGAATATTTTCAAATCAGTGACAGAAAAAGAAAGTGAAACTAATCAAGAAGTTCTTGGTTATAACCAAAAGATTAGCATTTTACCAGAAAATCAAGTAAACTTTGAGTATTGGGAGAAGTTTCTTATTGAGGAGGATGAATCAAACGGTTCTCATTGA 891 0.3737 MVRPPSCNESGVKKGPWTPEEDEKLKSYVSKHGKGTWRTLPKHAGLNRCGKSCRLRWENYLRPDIKRGRFTDEEEQLIFNLHSVLGNKWAKIATHLPRRTDNDIKNHWNTNLRKKLLQMGIDPETHKPRTDFNYLMNLSHLLGMSNLGTSTSPWANPYVNQFAKLQLVQNMLQLINNNSSLVNMGNPNYNLLGNQILNPLDTFLNGTNLQNKDSILTSQEYANPNGINNNSCMLMSQTCSDSSRQNIFKSVTEKESETNQEVLGYNQKISILPENQVNFEYWEKFLIEEDESNGSH 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02198 296 CDD SANT 69 112 IPR001005 -
Pste7g02198 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pste7g02198 296 FunFam Transcription factor RAX3 7 67 - -
Pste7g02198 296 CDD SANT 16 61 IPR001005 -
Pste7g02198 296 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pste7g02198 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste7g02198 296 Gene3D - 13 66 - -
Pste7g02198 296 Gene3D - 69 133 - -
Pste7g02198 296 FunFam Transcription factor MYB39 69 130 - -
Pste7g02198 296 PANTHER F14D16.11-RELATED 1 261 - -
Pste7g02198 296 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pste7g02198 296 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste7g02198 296 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste7g02198 296 SMART sant 13 63 IPR001005 -
Pste7g02198 296 SMART sant 66 114 IPR001005 -
Pste7g02198 296 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02198 Pste-Chr7 20309725 20311640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02198 1 193 MYB Transcription Factor Family AT5G16770 58.128 2.10e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste7g02198 Myb_DNA-binding 8.9e-17 CL0123