Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02193 GAGAGACTATAATGGGTGGACAAGGAACGATGTTTAGCAATTGATTGGTGTTTTTGATGTGTCTTGGATGGCCTCTAGGGGAACTGGAACTCTGATTCTGGTCTGTCTCTTATGGCTTTTCTTCCTCTGTGCCACCATTGCTTTCTTCCAGCTCCACTTGGTAGACAACCGAACCACCACCCATCCTTCCTCTCACAGTAACTTGTTCGCAACTCAACACCATCGTTCAGATGCCCCTTTGGAACAGGATTTGGAGGGTGTCACCAATAAGGTGTATTTTGATATACAGATCAATGGGAAACAAAAGGGTATGCTTCATTCCTTATCAGGTCGCATAGTCATGGGGCTTTTTGGGAACACAGTACCAAAAACTGTAGAAAACTTTCGAGCACTTTGTACAGGTCGTAGTAGTAAAAGCTATATTTTAACAGCATCGCATTTCAGGAGAGAAGGGTTGGGAAGAAGTGGGAAACCTCTTCATTATAAAGGGAGCACATTCCATAGGATTATACCTAGCTTTATGGCCCAGGGCGGTGATTTCACCCGTGGTGATGGAAGAGGTGGAGAATCCATATATGGTGATAAGTTTGCTGATGAAAACTTCAAGTTGAAGCATACTGGACCAGGATACTTATCCATGGCAAATTCTGGGCAGGACACCAATGGGTCTCAGTTTTTCATAACTACTGTAAAAACAAGCTGGCTGGATGGGCGACATGTTGTATTTGGCAAAGTAGTTTCCGGTATGGACGTTTTGTACAGGATTGAAGCAGAAGGAAGTGAAGGTGGCTCACCTAAGAGCAAGGTTGTCATATTAGACAGTGGGGAGTTAACTTCATAACATGGCTGCGGTAACTACCCACAACCACGGATTCACAAAATTCAGTGTGCATATTCATTATTTAGTAAAATAATAAGTTTGCAGATGTTCTTGTAATTTAAGACTGTTCTGTATTGTTGTTATTTTGCTTAGTCTTGTTCCAAGGAATGAAACTTTTTTATGTGTAATAGGTACGAGGATAAATTATTTATTCAAGTGCATCGTATGGCTTCACCATTGTGGATAAAATAATATAAAGTGAAAAAGGCA 1090 0.4119 MASRGTGTLILVCLLWLFFLCATIAFFQLHLVDNRTTTHPSSHSNLFATQHHRSDAPLEQDLEGVTNKVYFDIQINGKQKGMLHSLSGRIVMGLFGNTVPKTVENFRALCTGRSSKSYILTASHFRREGLGRSGKPLHYKGSTFHRIIPSFMAQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGYLSMANSGQDTNGSQFFITTVKTSWLDGRHVVFGKVVSGMDVLYRIEAEGSEGGSPKSKVVILDSGELTS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02193 257 CDD cyclophilin_ABH_like 68 253 - -
Pste7g02193 257 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 87 251 IPR002130 GO:0000413|GO:0003755
Pste7g02193 257 Gene3D - 58 257 IPR029000 -
Pste7g02193 257 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 88 254 IPR002130 GO:0000413|GO:0003755
Pste7g02193 257 SUPERFAMILY Cyclophilin-like 65 255 IPR029000 -
Pste7g02193 257 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 68 255 - -
Pste7g02193 257 FunFam Peptidyl-prolyl cis-trans isomerase 63 256 - -
Pste7g02193 257 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 139 156 IPR020892 GO:0003755|GO:0006457
Pste7g02193 257 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 156 IPR002130 GO:0000413|GO:0003755
Pste7g02193 257 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 187 202 IPR002130 GO:0000413|GO:0003755
Pste7g02193 257 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 215 230 IPR002130 GO:0000413|GO:0003755
Pste7g02193 257 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 202 214 IPR002130 GO:0000413|GO:0003755
Pste7g02193 257 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02193 Pste-Chr7 20253314 20256244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02193 23 252 U-box Gene Family AT5G67530 34.025 2.81e-25 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02193 7 20253314 20256244 Pste7g02193 7 20253314 20256244 ECH