Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02175 AATATTTAGTGGTTTTGCTATATATAGGCGTTGGCGACGTATTCATTGTAATTAATTTGTGATCCTTGAACGTTATCTTTTCTGTTTGAGGTGGAACATGAAGTGAAAGCTGAAACACATTAGAGAAGAAGGTTAATTGTCCAACTGAGGCAAGAGACAAAGACTATTTTAAGCTTCTGGCTCTGCCACTTTCTTTTTCAGGCCAAGTCTTCACGTTTGAATGTTTTTCTTCCCAAAAAGAGAGCGTGGTGGTACCCTTTAGTTACTGATCAACAGAGGAAACTCATAAATGGAGAAACTGAAATTATCTGCTAAGCATGATCCTAATTCCAGATGTGATCAGGCAGATTCATTTCCCTTATTCGAACCGCGAGAGAGTAAAAATGTTGAACAGCAGAGAAATAGAAGAGATGAAGATGACACAAAGGATGGAAATTTGGGAGGAGGGTCTGTAATTAATCCCTCCAATTCCGCAAACAGTAGGGAATCTGTCAACAAATGGATGGCATTTGCTAAGAAGCCTGGTTTAACGGTTGATGACAGTTCAGCAGCAAAGGATAAAAGTTTATCAGAGTACAGCTATTTGAGTAGTCATCTAAAAGAGAAGTCCTCTTATGATAAACAAGTTTTATCTGAAGTGAGCATAGCTGAGAGAACTGCTGAATGGGGTCTTGTGGTGAACTCAGCGAACTTCAAAACAAGTGGGGGAGAAAACTCAAGTGCCTCTTTTGATGGTGACAGAAGCAGAAACATGTCAGATAAATTTGTTGAATCAATGCGAACATCTGGGGAGTCAAATTATGGATCTGAGTCATCATCAGGGGTGTTCCCAAGGGTATCACAAGAGTTGAAGGAAGCATTGGCCACGCTGCAGCAGACATTTGTTGTCTCAGATGCAACCAAACCAGATTGTCCAATCATGTATGCTAGCAGTGGCTTTTTTACTATGACTGGCTATTCTTCAAAGGAGATTATTGGAAAGAATTGTCGATTTCTTCAGGGGCCTGAGACAGACCAGAATGAAGTGGCCAAAATTCGGGATGTTATTAGAAATGGGAAAAGTTATTGTGGCAGACTCTTAAACTACAAGAAAGATGGAACTCCATTCTGGAATCTTCTCACTGTCACTCCCATCAAAGATGACAATGGAAATACTATCAAATTCATTGGAATGCAGGTTGAGGTGAGCAAGTACACAGAAGGTGTGAATGAAAAGGCATTACGACCAAATGGATTGCCAAAGTCATTAATTCGTTATGATGCTCGTCAAAAGGAGAAAGCTTTGGGTTCGATCACTGAGGTTGTACAAACTGTTAAGGACCCAAAATCCAGTGCTAGTGATAGGAGTGGTGGTACTGCCATCAAGCATGAAGAGAAAGAGAAGTTCAATTTGGATTTTGTTTTGCCAAAGTCTGCTGATATTGGAAATACAAGCACACCAGGTAGACAAGCTTCTCCACTCAATCTACAACGTATGACTTCTAGTCAGGATAAGAGCAGAACATCGCGATCAGGAAGGATTTCTTTCAAGGGTTTGAAAGGGAGATCTCTGAGTTCTGCAGAGGAGAAGCGAATTGTTGAACATGAGCTTTTGATGACCAAGGAAATAGAGTGGTCTAACAACTTGGAGCATTCACTAAGAGAGAGGGACATAAGGCAGGGAATTGATCTAGCAACCACATTGGAGCGGATAGAAAAGAACTTTGTGATTTCTGATCCTAGACTTCCAGATAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTTACGGAATATACACGAGAAGAAATTTTGGGACGAAATTGTCGGTTTCTTCAAGGACCAGAAACGGATCAGGCAACCGTTTCTAGGATAAGGGATGCTATAAGAGAACAAAGGGAAATCACTGTTCAGTTGATCAACTATACTAAGAGTGGAAAGAAGTTCTGGAATTTGTTTCACTTGCAACCTATGCGTGATCAAAAGGGTGAGCTTCAATACTTCATTGGTGTTCAACTAGATGGAAGTGATCATGTGGAACCCTTAAAAAACCGCCTGTCTGAGACAACTGAGCTACAAAGTGCTAAGCTGGTTAAAGCCACTGCAGAAAATGTTGATGGAGCAGTCAGAGAACTTCCAGATGCCAATTTGCGACCAGAAGATTTGTGGGCAATTCATTCCCAACCTGTCTCTCCACGGCCACACAAAAAGGACAATCATTCTTGGATAGCAATACGAAAGGTAGCTTCAAGAGGCGAAAAAATTGGCCTGCAACATTTTGTGCCTATAAGACCGTTAGGTTGTGGAGATACTGGCAGTGTTCATTTGGTGGAACTCAAAGGTACTGGTGAACTATATGCAATGAAGGCAATGGAAAAGTCCATAATGCTAAATCGTAATAAGGTTCACCGAGCATGCATTGAGAGAGAGATTATATCATTATTAGATCATCCTTTTCTTCCAACACTATACACCTCATTTCAGACTTCTACACATGTATGTTTGATTACTGACTTCTGCCATGGGGGAGAGTTGTTTGCATTGCTTGACAGGCAACCAATGAAAATTTTCAAAGAAGAATCAGCAAGATTCTATGCGGCAGAGGTTGTCATTGGTTTGGAATATCTACACTGTCTAGGTATAATTTATCGTGACTTAAAGCCTGAAAATATCTTACTTCAGAAGGATGGTCATGTTGTGTTAACGGATTTTGATCTATCATATATGACATCTTGTAAACCCCAGGAAATTATAACTGGAGCGAGGCATTCTAGCGCTATAGATTGGTGGACCCTTGGTATCTTGTTGTATGAGATGATCTATGGTCGGACACCATTCAGGGGAAAGAATAGACAGAGGACATTTTCCAACATCTTACACAAGGATCTTACCTTTCCAAGCAGCATCCCGACTCCACCCCCATTAGATGTTCCTCTTAAATTGATAGCAAAAGATCCGGTGGCAAAGGATATAAAGTGGGAAGATGATGGGGTGCTAACTAGCTCAATTGATATGGACATTTTTTAACGGTTTGAACCGTTCACTCACCATGTTTTCTCAGCATCATCAGTGATTCATGCTGCAACAATCACGTGGTCTAAGACATTGAGGTGTAATAGTGTATTGATTTGGTTATAGTCCAATACTATCATGTGATACTTCAAACAAAATCTAAGTTGTGTAGGATTAGCAGAAAAGTAGAATGTACATTGAATAAGGACGTTTCCTTATAGAAACAAGCATCCTGGTTGTGCACATCGACAATACATATAATTTTGTAGGTGGCTTAAAAATATCATACATATTACTATCTATTTTGATTATGGTACATGTAATAAAATTTATTTATTGC 3335 0.3985 MEKLKLSAKHDPNSRCDQADSFPLFEPRESKNVEQQRNRRDEDDTKDGNLGGGSVINPSNSANSRESVNKWMAFAKKPGLTVDDSSAAKDKSLSEYSYLSSHLKEKSSYDKQVLSEVSIAERTAEWGLVVNSANFKTSGGENSSASFDGDRSRNMSDKFVESMRTSGESNYGSESSSGVFPRVSQELKEALATLQQTFVVSDATKPDCPIMYASSGFFTMTGYSSKEIIGKNCRFLQGPETDQNEVAKIRDVIRNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDNGNTIKFIGMQVEVSKYTEGVNEKALRPNGLPKSLIRYDARQKEKALGSITEVVQTVKDPKSSASDRSGGTAIKHEEKEKFNLDFVLPKSADIGNTSTPGRQASPLNLQRMTSSQDKSRTSRSGRISFKGLKGRSLSSAEEKRIVEHELLMTKEIEWSNNLEHSLRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVSRIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLKNRLSETTELQSAKLVKATAENVDGAVRELPDANLRPEDLWAIHSQPVSPRPHKKDNHSWIAIRKVASRGEKIGLQHFVPIRPLGCGDTGSVHLVELKGTGELYAMKAMEKSIMLNRNKVHRACIEREIISLLDHPFLPTLYTSFQTSTHVCLITDFCHGGELFALLDRQPMKIFKEESARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSYMTSCKPQEIITGARHSSAIDWWTLGILLYEMIYGRTPFRGKNRQRTFSNILHKDLTFPSSIPTPPPLDVPLKLIAKDPVAKDIKWEDDGVLTSSIDMDIF 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02175 906 SUPERFAMILY Protein kinase-like (PK-like) 635 885 IPR011009 -
Pste7g02175 906 PANTHER PROTEIN TWIN LOV 1 342 648 - -
Pste7g02175 906 NCBIfam PAS domain S-box protein 209 300 IPR000014 -
Pste7g02175 906 NCBIfam PAS domain S-box protein 483 574 IPR000014 -
Pste7g02175 906 ProSiteProfiles PAC domain profile. 257 311 IPR000700 -
Pste7g02175 906 ProSiteProfiles PAC domain profile. 531 585 IPR000700 -
Pste7g02175 906 MobiDBLite consensus disorder prediction 377 410 - -
Pste7g02175 906 SMART pac_2 260 302 IPR001610 -
Pste7g02175 906 SMART pac_2 534 576 IPR001610 -
Pste7g02175 906 Gene3D Transferase(Phosphotransferase) domain 1 742 884 - -
Pste7g02175 906 CDD PAS 480 572 IPR000014 -
Pste7g02175 906 SMART pas_2 185 254 IPR000014 -
Pste7g02175 906 SMART pas_2 459 528 IPR000014 -
Pste7g02175 906 MobiDBLite consensus disorder prediction 377 411 - -
Pste7g02175 906 Gene3D Phosphorylase Kinase; domain 1 657 741 - -
Pste7g02175 906 MobiDBLite consensus disorder prediction 1 16 - -
Pste7g02175 906 SMART serkin_6 658 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g02175 906 ProSiteProfiles PAS repeat profile. 457 530 IPR000014 -
Pste7g02175 906 FunFam Putative LOV domain-containing protein 197 353 - -
Pste7g02175 906 ProSiteProfiles Protein kinase domain profile. 658 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g02175 906 FunFam LOV domain-containing protein 446 610 - -
Pste7g02175 906 Gene3D PAS domain 446 610 - -
Pste7g02175 906 Gene3D PAS domain 197 361 - -
Pste7g02175 906 MobiDBLite consensus disorder prediction 1 64 - -
Pste7g02175 906 ProSiteProfiles PAS repeat profile. 183 256 IPR000014 -
Pste7g02175 906 MobiDBLite consensus disorder prediction 30 48 - -
Pste7g02175 906 SUPERFAMILY PYP-like sensor domain (PAS domain) 204 296 IPR035965 -
Pste7g02175 906 ProSitePatterns Protein kinases ATP-binding region signature. 664 687 IPR017441 GO:0005524
Pste7g02175 906 Pfam PAS domain 204 300 IPR000014 -
Pste7g02175 906 Pfam PAS domain 480 572 IPR000014 -
Pste7g02175 906 Pfam Protein kinase domain 661 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g02175 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Pste7g02175 906 FunFam Serine/threonine-protein kinase OXI1 742 810 - -
Pste7g02175 906 SUPERFAMILY PYP-like sensor domain (PAS domain) 476 572 IPR035965 -
Pste7g02175 906 CDD PAS 210 299 IPR000014 -
Pste7g02175 906 FunFam LOV domain-containing protein 657 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02175 Pste-Chr7 20035711 20064733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02175 119 905 AGC Kinase Gene Family AT5G58140 66.931 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pste7g02175 Pkinase 1.6e-45 CL0016