Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02171 GGAGAAGCCCATGTGTAAAACCCTAGAATGAAATTAGAGTGGTTGTGTTGCTGATACCAGTGAAGGTGAGGAATCGAATCTTGGAACATGGCGGCGAGCGATCGCACAGTGTTGCAATTCTCTTCTTCATCTTCGCAAAGCCTGTCTGCGAAGGTCCACCCTCTGGTGATCTTCAACATCTGCGATTGCTATGTCCGTCGCCCTGACCAAGCCGACCGCGTCATCGGAACCCTACTCGGCTCCGTCCTTCCCGATGGGACCGTCGATATCCGCAATTCCTATGCTGTTCCTCACAACGAGTCTATCGAACAGGTTGCTTTGGATATAGAATATCACCACAATATGTTAATATCCCACCAAAAAGTGAATCCTAAGGAAATCATAGTTGGATGGTATTCAACTGGTCTTGGAGTAACTGGTGGTAGTGCATTAATCCATGAATTTTATTCCAGAGAAGTACCCAATCCCATACACTTGACTGTTGATACGGGATTTACAAATGGAGCGGGTACCATTAAAGCATATGTGTCTAACAATTTATCTTTAGGAGAACGGCAAATTGCTGCACAATTTCAAGAAATTCCATTGGATCTTCGTATGGTGGAAGCTGAGCGAATTGGATTTGATATGCTGAAGGCAACTGCCGTTGACAAAATTCCGTCAGATTTAGAAGGGATGGAAGCATCAATGCAACATCTACTAGTCCTGATGGATGACATCTACAAATACGTAGACGATATTGTGGAAGGGCGAGTTGCACCAGACAACAACATTGGAAGATATATATCAGATGCTGTAGGTTCTCTTCCTAACGTGTCCCCATCTGTTTTTGATAAGCTTGTGAATGACAGTTTGCAGGATCACTTGCTTTTGCTATATTTGTCTAGCATCACAAGAACACAGCTTAGCTTGGCCGAAAAATTGAACACAGCTGCTCAGATTCTGTGATTCTTGTTATATTTTCTTTACATGGAATGTCACCATTTATACTTCACTTTTATTTTGCTTTATTTTTTGGTTGTTGTATTTTGTGCTTGTCTTTACATAGGTAAGTTCTCTTGGATTTTGCTTTATTTCCTTCCGTTCCCTATTTATTTCTTATATCTTGCCACCGTATAAACTAAGATTTAACCGTGTCTTTTAGAAGTTAAGGTCCCAATTAGGGTGGTTTTGAGTTTTGGTTTTTTAATTATTTTTTAAATGGTTTTTACTCAATTTTACTTAATTTTTTTCAAAGTCAATGATGGTG 1249 0.4019 MAASDRTVLQFSSSSSQSLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNESIEQVALDIEYHHNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHEFYSREVPNPIHLTVDTGFTNGAGTIKAYVSNNLSLGERQIAAQFQEIPLDLRMVEAERIGFDMLKATAVDKIPSDLEGMEASMQHLLVLMDDIYKYVDDIVEGRVAPDNNIGRYISDAVGSLPNVSPSVFDKLVNDSLQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02171 286 CDD MPN_eIF3f 22 279 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Pste7g02171 286 FunFam Eukaryotic translation initiation factor 3 subunit F 9 187 - -
Pste7g02171 286 Gene3D Cytidine Deaminase, domain 2 7 187 - -
Pste7g02171 286 Hamap Eukaryotic translation initiation factor 3 subunit F [EIF3F]. 19 282 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Pste7g02171 286 SMART pad1_6 20 151 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pste7g02171 286 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 11 283 - -
Pste7g02171 286 Pfam Maintenance of mitochondrial structure and function 173 279 IPR024969 -
Pste7g02171 286 ProSiteProfiles MPN domain profile. 21 152 IPR037518 -
Pste7g02171 286 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 19 124 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02171 Pste-Chr7 19969293 19972864 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02171 2 286 Eukaryotic Initiation Factors Gene Family AT2G39990 75.258 5.40e-158 440
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02171 7 19969293 19972864 Pste7g02171 7 19969293 19972864 ECH