Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02168 ATGGAAGAGGGCATGTCAGAATATTGTATTAGAGGTGGAAGTATTGGTGGTAACAGTGGCACTACTACTGGCACTAAGTGTGGACGTTGGAATCCCACTACTGAACAGGTTAAGGTTCTGACTGAACTGTTCAGTTCTGGACTTCGAACCCCTAGCACTGATCAGATTCAAAGGATCTCTAATCAACTTAGCTTTTACGGTAAGATTGAGAGCAAGAACGTGTTCTATTGGTTTCAGAATCATAAGGCTAGGGAAAGACAAAAGCGTCGCAAGTTCAATTTGTTCCTTTTTTTAGCAGCTTTTACTCAGCTGTATCAGGTTTCTGAGCCCGAGCGGGTTATGGAGACTCTTCAACTCTTCCCCTTGAACTCCTTTGGTGAGTCAGAAACAAAGAATCTGAGGGTACATGCAAGTGAATGCAGGGATAGCACTATGTTTTCATACACAGTGGGGGAACAAATGGATCACCCACCATTAGATCTTCGCTTGAGTTTTATGTGA 501 0.4311 MEEGMSEYCIRGGSIGGNSGTTTGTKCGRWNPTTEQVKVLTELFSSGLRTPSTDQIQRISNQLSFYGKIESKNVFYWFQNHKARERQKRRKFNLFLFLAAFTQLYQVSEPERVMETLQLFPLNSFGESETKNLRVHASECRDSTMFSYTVGEQMDHPPLDLRLSFM 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02168 166 FunFam WUSCHEL-related homeobox 11 26 94 - -
Pste7g02168 166 SUPERFAMILY Homeodomain-like 20 91 IPR009057 -
Pste7g02168 166 CDD homeodomain 29 89 IPR001356 GO:0003677
Pste7g02168 166 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Pste7g02168 166 Pfam Homeodomain 27 87 IPR001356 GO:0003677
Pste7g02168 166 Gene3D - 26 94 - -
Pste7g02168 166 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 16 91 IPR044555 GO:0003700|GO:0099402
Pste7g02168 166 SMART HOX_1 25 92 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02168 Pste-Chr7 19958559 19959183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02168 8 166 Wox Gene Family AT3G11260 53.333 8.07e-60 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pste7g02168 Homeodomain 1.7e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02168 7 19958559 19959183 Pste8g01265 8 6698082 6700114 ECH
Pste7g02168 7 19958559 19959183 Pste7g02168 7 19958559 19959183 ECH
Pste7g02168 7 19958559 19959183 Pste8g01265 8 6698082 6700114 PCT