Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02157 ATGTCACAGTTTGTGTTATTAATATTATTATGCTGTTCAGTTGGTCAGCTAAGCTTGGGTTTCACATGGCAAGAGTACCGCGAGGCTCTCGAGAAATCCATTCTCTTCTTTGAGGGACAACGATCAGGAAAATTGCCTTCCAACCAGCAACAAACATGGAGGGGAGATTCTGGATTGTCCGATGGCTCTTCTTACCATGTGGACCTAGTAGGTGGTTATTATGATGCTGGGGACAACGTCAAGTTTGGGCTGCCAATGGCCTTCACCACTACATTGTTAGCATGGAGTGTGATTGAATTTGGAAGCTCAATGCAGGGCCAAATTGAAAATGCTAGAGCTGCTATCCAGTGGAGCACGGATTACCTTCTTAAGGCCTCCACCACCACCCCTGACACATTATATGTCCAAGTAGGAGAGCCAAACATGGATCACAGGTGTTGGGAAAGGCCTGAAGATATGGATACGCCACGCAATGTGTACAAGGTATCAGCTCAAAACCCAGGGTCGGATGTAGCAGCAGAGACCGCGGCTGCATTGGCTGCTTCTTCAATAGTTTTCAAAGATTCTGATCCCAGATATTCCTCCAAATTGCTTCAAGCAGCCATCAAAGTATTCAATTTTGCAGACCGTTACAGGGGGTCTTATAGTGACTCCCTTAATTCGGTTGTGTGTCCATTCTACTGCTCTTACTCTGGATACCATGATGAGCTTCTGTGGGGTGCATCATGGATTTATAGAGCCTCGGGAATTAGCTCTTACATGCAATATATACAGTCCAATGGCCACATACTGGGTGCTGATGATGATGGTTACACCTTCAGTTGGGATGACAAGCGACCTGGAACAAAAATCCTCCTTTCCAAGGAATTCCTGGAGAAAAATGCTGAAGAGTTCCAATCATTTAAGGCACATGCGGACAATTACATTTGTTCGCTAATGTCGGGAACACCAGGTTTCCAGGCTCAGTATACCCGAGGAGGGCTTCTGTACAAGGGGAGTGAGAGCAATTTGCAGTATGTGACATCAACGAGCTTCCTTCTCTTGACATACGCCAAGTATATAAACGGAAACGGTGGTGGTGGTATCCAATGTGGGACTTCAACAGTGACGGGACAAAACCTCGTAACACTGGCGAAAGCACAAGTGGATTATATTTTGGGAAATAATCCAACACAGATGTCTTATATGGTGGGTTTTGGGGACAGGTATCCAAGGCATATCCACCACAGGGGTTCTTCTCTACCTTCCATTCATGCACAGACTCAACACATTTCCTGTAATCAAGGGTTTCAATATTTCCATTCAGGCTCACCCAATCCAAATGTCCTTGTTGGAGCCATCGTCGGTGGTCCTGATAGCAATGACAATTTCTCTGATGATCGAAATAACTATCAGCAATCTGAACCAGCAACATACATCAATGCGCCGTTTGTAGGTGCTGTTGCCTATTTCTCTGCTAAATATTAAATAAACACTACGTTTGTATTACTATTTAATTACAACAGTGTTTTGGTTGCAACCAATGCTTCCCTTGCTAATCTACAAATCCATATTTCTTTCAACAATAGTAAAATGTATTTGTCGTCCGTGATATCAGCCATTAAATTTCGCC 1612 0.4404 MSQFVLLILLCCSVGQLSLGFTWQEYREALEKSILFFEGQRSGKLPSNQQQTWRGDSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLAWSVIEFGSSMQGQIENARAAIQWSTDYLLKASTTTPDTLYVQVGEPNMDHRCWERPEDMDTPRNVYKVSAQNPGSDVAAETAAALAASSIVFKDSDPRYSSKLLQAAIKVFNFADRYRGSYSDSLNSVVCPFYCSYSGYHDELLWGASWIYRASGISSYMQYIQSNGHILGADDDGYTFSWDDKRPGTKILLSKEFLEKNAEEFQSFKAHADNYICSLMSGTPGFQAQYTRGGLLYKGSESNLQYVTSTSFLLLTYAKYINGNGGGGIQCGTSTVTGQNLVTLAKAQVDYILGNNPTQMSYMVGFGDRYPRHIHHRGSSLPSIHAQTQHISCNQGFQYFHSGSPNPNVLVGAIVGGPDSNDNFSDDRNNYQQSEPATYINAPFVGAVAYFSAKY 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02157 488 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 457 475 IPR033126 -
Pste7g02157 488 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 384 410 IPR018221 -
Pste7g02157 488 FunFam Endoglucanase 22 488 - -
Pste7g02157 488 Gene3D - 23 488 IPR012341 GO:0005975
Pste7g02157 488 PANTHER ENDO-1,4-BETA-GLUCANASE 6 486 - -
Pste7g02157 488 Pfam Glycosyl hydrolase family 9 26 480 IPR001701 GO:0004553|GO:0005975
Pste7g02157 488 SUPERFAMILY Six-hairpin glycosidases 24 485 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02157 Pste-Chr7 19831682 19834625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02157 24 485 Glycoside Hydrolase AT1G02800 63.636 0.0 600