Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02124 GGGGACTTTGTTTCTTCTTACTCAGAGAGAAAGTCTGGTCTTATGAAATGGTTTGGTAAGATTTTCAAAATTGGGTCCAGTAGAGGAAGGGGTGGTGGTCGTCATCTGCAGCAGCCAGTAGAGGAAAACATGGTTTGGCCAGCTCCAGTTAGATCGTTGGATGACCGTGCTAGATCTCGGAAGGAGGAAGAGGATCTGGACCGTGCAATTGCACTTTCTTTAGGCGAAGGTTTAAAGAGACCAACTGGATATAGATGGCGGACAGGAACTGATGAAGATTATGCAAAGGCTCTTCAGGATCGCATGTTTTCATCTTCACATCCTCCATATGTCCCTGTACCTTTTTATCCCCGGGGATATGGTATGCCATCGCATAACAGAATATGTGGAGGGTGCAACCAAGAGATACTCTATGGCAATTGTTTAGGAGTTGGTCATAGTTATTTTCATCCAGACTGCTTTCGGTGTCACTCTTGTCGTTACCCCATTACTGAGCGTGAGTTTTCTTTGTCAGGAAAGCATCCTTATCACAAGTCCTGTTTTAAGGAATTGACCCACCCTAAATGTGAAGTTTGTCATCAATATATACCAATAAATGCTGCTGGTTTGATTGAGTATAGATGCCACCCTTATTGGAACCAAAAGTATTGTCCATCTCATGAATATGATAATACGGCTCGGTGCTGCAGTTGTGAAAGATTAGAGTCTCGGGATGAAAGATACTATAGATTGGAAGATGGAAGAATTTTGTGCTTTGAGTGCATGGAATCTACTGTAACGGACACGGGTGAATGTCAACCCCTTTATCATTCTATCAGAGACTATTATGAAGGAATGAATATGAAAATAGATCAACAAATCCCAATGCTTCTTGTTGGGAGAGAAGCGCTTAATGAAGCCATTGTTGGGGAGAAGCATGGCTTTCATCACTTACCAGAAACAAGGGGACTATGCCTTTCTGAAGAGCAAACAGTCACAAGTGTATATAGATGGCCAAGAATTGGAGGCTATCGATTAATAGGGATGAGATCTCAAGCTCAAAAGCTGCCTAGAAAGTGTGAAGTTACAGCTATTCTTGTTCTCTATGGTCTTCCAAGGTTACTCACAGGTGCTATACTTGCCCATGAATTGATGCATGCTTGGTTACGCCTTAAAGGTTACCAAAACCTTAGTCCTGAAGTAGAAGAAGGTATTTGTCAGGTTCTTTCATACATGTGGCTTGAAGCAGAGGTGATGTCATGCGGTAGAACCATGCCATCAACATCAGCAGCTTCTTCCTCCTCCCACTCTCACTCATCAAAGAAAGGTGCGAAATCTCATGTTGAAAATAAATTGGGTGAGTTTTTTATGAACCAGATTGCCAATGATTCTTCCCCAGCTTATGGTGGAGGCTTTAGAGCAGCTAATGTAGCAGTTAATAAATATGGTTTACGTTGTACTTTGGAGCATATTCGTTTGACTGGTCATTTCCCACTGTAATAAGACACAAAGGTTGGACACCTTCCCTCCTGTTATTTCATGCCCCAGGGGGAATTAATGTGGTCCCTATGTAAGGACGTCCACATCCAAGTTGAATAACATTATACACGCCTGGTTTTAATTCATTAGATGGTATTATTATTTGTGATGCTTTTGGTATCAAGATGATTTTTGGGTATCCGATCATTAAATATTTACAGAGAAAGTTGTTATCCAAATTCAATAA 1705 0.4135 GDFVSSYSERKSGLMKWFGKIFKIGSSRGRGGGRHLQQPVEENMVWPAPVRSLDDRARSRKEEEDLDRAIALSLGEGLKRPTGYRWRTGTDEDYAKALQDRMFSSSHPPYVPVPFYPRGYGMPSHNRICGGCNQEILYGNCLGVGHSYFHPDCFRCHSCRYPITEREFSLSGKHPYHKSCFKELTHPKCEVCHQYIPINAAGLIEYRCHPYWNQKYCPSHEYDNTARCCSCERLESRDERYYRLEDGRILCFECMESTVTDTGECQPLYHSIRDYYEGMNMKIDQQIPMLLVGREALNEAIVGEKHGFHHLPETRGLCLSEEQTVTSVYRWPRIGGYRLIGMRSQAQKLPRKCEVTAILVLYGLPRLLTGAILAHELMHAWLRLKGYQNLSPEVEEGICQVLSYMWLEAEVMSCGRTMPSTSAASSSSHSHSSKKGAKSHVENKLGEFFMNQIANDSSPAYGGGFRAANVAVNKYGLRCTLEHIRLTGHFPL 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02124 492 Gene3D Cysteine Rich Protein 124 187 - -
Pste7g02124 492 Pfam LIM domain 129 182 IPR001781 -
Pste7g02124 492 ProSitePatterns LIM zinc-binding domain signature. 129 163 IPR001781 -
Pste7g02124 492 ProSiteProfiles LIM domain profile. 127 187 IPR001781 -
Pste7g02124 492 PANTHER PROTEIN DA1-RELATED 2 17 491 IPR045218 -
Pste7g02124 492 SMART lim_4 128 180 IPR001781 -
Pste7g02124 492 CDD LIM_DA1 129 181 - -
Pste7g02124 492 Pfam Protein DA1 278 487 IPR022087 -
Pste7g02124 492 FunFam Protein DA1-related 2 116 182 - -
Pste7g02124 492 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 155 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02124 Pste-Chr7 19456705 19461259 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste7g02124 DA1-like 9.1e-96 CL0126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02124 7 19456705 19461259 Pste7g02124 7 19456705 19461259 ECH
Pste7g02124 7 19456705 19461259 Pste8g01335 8 7157248 7161095 PCT