Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02086 ATGGATGAATCTCAGTACTTGTTGTGGATCAAGAGGAAACAGATCTTGAAGTCACATATTCAACAACCATTTGGAGCCGGCAACAACAACTACTCATCATGGGAGGAAAGGGCTTTTGCAGAAGATGCTGCTAGGATACTTGGTGGGTGCATATGGCCTCCAAGATCTTACTCATGCAATTTCTGTAAAAGAGAGTTTAGGTCTGCTCAGGCTCTAGGGGGACACATGAATGTGCACAGAAGGGACAGGGCTAGACTCAAACAAAGCCTTAGTCACCATAATGAAGCCCTTCAAAATCATCACAAAAATGATTGTTCAGTTGCAACAAGCAAAGTCTCATCTTCTAGGCCTTCAAATATATCCACCCAAGAAAATTGTTATCATCAGCCTACCATGTCTCCTTATTCTTCCTCAATTAGCTGGGGACAGCACCACATGGTGTCTCCTGATTCAGAACCAAAAGGGCCTGCAGTGAATGCAAGGGAAGAGTTTCTAAAAGGTTTCGGTTGTAATGATTATGTTGAAACAAGTTTGTCTATGGGACAAAGTTCAGTGTTTGGCCAAAAATTACCAACTGATTCATGTGGAGACGAAGCCTTCAATTATAAAAGATCAAAGACTTCTATGCCTCCTTTGCCTGTCTTCCTCAAGCCATGTTCAAAAGATAGACATCTAACTGTTCAAACTGCAGAATTTGTACTTGGACTCAAGCCCGGAATGGAAGACTTAGATCTTGAACTCAGGCTGGGGAAGCAACAGAAAGTTAATTAG 771 0.4202 MDESQYLLWIKRKQILKSHIQQPFGAGNNNYSSWEERAFAEDAARILGGCIWPPRSYSCNFCKREFRSAQALGGHMNVHRRDRARLKQSLSHHNEALQNHHKNDCSVATSKVSSSRPSNISTQENCYHQPTMSPYSSSISWGQHHMVSPDSEPKGPAVNAREEFLKGFGCNDYVETSLSMGQSSVFGQKLPTDSCGDEAFNYKRSKTSMPPLPVFLKPCSKDRHLTVQTAEFVLGLKPGMEDLDLELRLGKQQKVN 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02086 256 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
Pste7g02086 256 SUPERFAMILY beta-beta-alpha zinc fingers 54 84 IPR036236 -
Pste7g02086 256 PANTHER OS07G0101800 PROTEIN 28 252 - -
Pste7g02086 256 MobiDBLite consensus disorder prediction 101 131 - -
Pste7g02086 256 Gene3D Classic Zinc Finger 54 125 - -
Pste7g02086 256 SMART c2h2final6 57 79 IPR013087 -
Pste7g02086 256 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Pste7g02086 256 MobiDBLite consensus disorder prediction 93 131 - -
Pste7g02086 256 Pfam C2H2-type zinc finger 57 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02086 Pste-Chr7 19153378 19154239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02086 28 161 C2H2 Transcription Factor Family AT2G37740 41.667 1.03e-27 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste7g02086 zf-C2H2_6 2e-06 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02086 7 19153378 19154239 Pste8g01370 8 7376652 7377524 PCT