Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02082 ATGGCCAATCGATGGTGGGCTGGGAATGTGGGAATCATAAGAGAGCAAGAGTTAATCGATACCAACACAACAACTGCCACTCCCACCAATAGCAGCAACAGCAACACTAACACTAACGCCAACACCAACACCACCGAGGAAGAGGTGAGCAGGGACAACGGTGAGGACCAGAACCAAAACCTCGCCAGCCACGAAGGATCAGAGCCCGGAAGCAGCGGTCGGAGGCCACGTGGAAGGCCTCCAGGCTCCAAAAACAAGCCCAAACCCCCCATCGTCATTACCAAGGAAAGCCCCAACGCCCTCCGAAGCCACGTCCTTGAAATCGCCTCCGGCAGCGACGTTGCCGAGACCATAGCCGCCTTCGCCAACCGCCGCCACCGCGGTGTCTCCGTTCTCAGCGGCAGTGGCATTGTCACCAACGTCACCCTCCGTCAACCCGCTGCCCCTGCCGGGGTCATAACCCTTCATGGAAGGTTCGAGATACTCTCCCTCTCCGGAGCCTTTTTACCCTCTCCTTCGCCCCCCGGCGCCACCGGCCTAACCGTCTACTTGGCCGGTGGGCAGGGCCAGGTTGTCGGTGGCACCGTTTCGGGTTCTTTAGTGGCCTCCGGGCCGGTCATGGTAATGGCCGCCACCTTCGCCAATGCTACTTATGAGAGATTGCCACTAGAGGATGAACAAGGTGAGGAGGAAATGCAAGTGCAACAACAGCAGCAGCAGCAGCAGCAACCACAACCCCAACAATCTCAAAGTTTGGGGGAACAGGTTTCCATGCCTATGTTTAATTTGCCTCCTAATTTGCTACACAATGGTCAGAACATGCCTCATGATGTGTTCTGGGGACCTCCGCCTCGCCCTCCTCCTTCCTTCTGA 873 0.5727 MANRWWAGNVGIIREQELIDTNTTTATPTNSSNSNTNTNANTNTTEEEVSRDNGEDQNQNLASHEGSEPGSSGRRPRGRPPGSKNKPKPPIVITKESPNALRSHVLEIASGSDVAETIAAFANRRHRGVSVLSGSGIVTNVTLRQPAAPAGVITLHGRFEILSLSGAFLPSPSPPGATGLTVYLAGGQGQVVGGTVSGSLVASGPVMVMAATFANATYERLPLEDEQGEEEMQVQQQQQQQQQPQPQQSQSLGEQVSMPMFNLPPNLLHNGQNMPHDVFWGPPPRPPPSF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02082 290 MobiDBLite consensus disorder prediction 19 97 - -
Pste7g02082 290 Pfam Plants and Prokaryotes Conserved (PCC) domain 102 214 IPR005175 -
Pste7g02082 290 Gene3D - 101 243 - -
Pste7g02082 290 CDD DUF296 102 213 IPR005175 -
Pste7g02082 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 36 281 IPR014476 GO:0003680
Pste7g02082 290 FunFam AT-hook motif nuclear-localized protein 101 229 - -
Pste7g02082 290 MobiDBLite consensus disorder prediction 225 290 - -
Pste7g02082 290 MobiDBLite consensus disorder prediction 232 257 - -
Pste7g02082 290 MobiDBLite consensus disorder prediction 19 47 - -
Pste7g02082 290 ProSiteProfiles PPC domain profile profile. 98 235 IPR005175 -
Pste7g02082 290 PIRSF ESCAROLA 15 289 IPR014476 GO:0003680
Pste7g02082 290 SUPERFAMILY AF0104/ALDC/Ptd012-like 98 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02082 Pste-Chr7 19116618 19117490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02082 1 290 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 54.487 2.92e-79 241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02082 7 19116618 19117490 Pste7g02082 7 19116618 19117490 ECH
Pste7g02082 7 19116618 19117490 Pste8g01374 8 7432710 7433528 PCT