Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02069 GAGAATTGAGGTATAGAGGTGACGATTACCGCACACCACACACAGACTTGACCATTTGCTTAACAAAATCCAAAAGGAAAAAAGAAAAAGGAAAACAAAAACTATATCACCGATTCTCGTGATCTTCGGCCTCGAATCGTATCGAATCGAATCGAGAGGTAAAAGATCCAATCCCGCCTCTGTTCTGTGATCGAAAACCGATAACGCTGTTTCCGATCACAACCGCAATCAGATTCAGCTGTTGTTCCTCGTCAATTTCGAATATTGAAAGGTTTTAATTGTCAATTTTGGTCAAGTCTCTAGTCAACCAGTGAAGTTTTGATTCAAGTTTTCAAATATATAGAGACATGAGTTTTGTTTTCCGAGGAACAAGAGCAGATATTGAAAATGGGTTTCCAGGATTTATACCTGAGAGGCGAGCATTGCGCGTTCATGCAACACGTCCTAGTAATTCCAATTCACTCACTTTTCTCGTGACAGTTCTTCTGTTGTTCATGATACTGAACTCTCACCAGATGTCCCCTAATTTTCTGCTCTGGCTGGTGCTTGGTGTTTTCTTGATGGCAACAATGTTGAGGATGTATGCAACATGTCAACAACTGCAAGCGCAGGCTCAAGCTCATGCTGCAGCAGCCAGTGGCATTCTTGGCCACACGGAACTAAGGTTGCATATGCCACCATCAATAGCCCTGGCAAGCCGAGGGCGTCTGCAGGGTCTCAGACTTCAGCTTGCACTTCTTGATCGGGAGTTTGATGATCTAGATTATGAAACTTTAAGAGCTCTAGATTCAGATAATGTTTCTACTGCACCTTCTATGACTGATGAAGAAATAAATGCTCTTCCTGTCCACAAATACAAGGTTTCTGGTCCTCAAAATGGTAGTTCCTCAATGCAACAAGCATCCACTTCTGCTCCCGCTGAGAAGAAGCAAGATAATTCGAGTGCTGTTGGGAGCATGAAAGCCTCTGACGATGAGCTCACTTGCAGTGTATGCTTGGAGCAAGTTAATGTTGGTGATGTACTGCGTAGCTTACCTTGCTTGCATCAGTTTCACGCTAATTGCATCGACCCCTGGCTGCGCCAACAAGGGACATGTCCTGTATGTAAATTTCGAGCTGGATCTGGATGGAGTGACAATGGACATAATGATATCGCGGACATGGTTTGAATACTTCGCCTAATTTTATTTATGGACGTGTGATGATCTTCTCCAACTGTAATTTTCGTCATGTATCAAAATTAGTAGCTTATGACTAGTATTCCTGTAATTACCCTGACGTGTAGGGATCAGAACAACAGCAGAATACCGTGTAACAACTATACAAGTTATACAGTTTGTTTCTCATTAAACCTACATTTTTTGGCCTGCTGTGCTTAAACTAAC 1385 0.4245 MSFVFRGTRADIENGFPGFIPERRALRVHATRPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGILGHTELRLHMPPSIALASRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMTDEEINALPVHKYKVSGPQNGSSSMQQASTSAPAEKKQDNSSAVGSMKASDDELTCSVCLEQVNVGDVLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSGWSDNGHNDIADMV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02069 273 ProSiteProfiles Zinc finger RING-type profile. 213 254 IPR001841 -
Pste7g02069 273 PANTHER TARGET OF ERK KINASE MPK-1 1 260 - -
Pste7g02069 273 SMART ring_2 213 253 IPR001841 -
Pste7g02069 273 SUPERFAMILY RING/U-box 208 257 - -
Pste7g02069 273 CDD RING-H2_PA-TM-RING 212 254 - -
Pste7g02069 273 Pfam Ring finger domain 212 254 IPR001841 -
Pste7g02069 273 MobiDBLite consensus disorder prediction 173 203 - -
Pste7g02069 273 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 188 259 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02069 Pste-Chr7 19022658 19027219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02069 1 273 C3H Transcription Factor Family AT3G55530 78.261 5.95e-147 410
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02069 7 19022658 19027219 Pste7g02069 7 19022658 19027219 ECH