Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02047 CAGAATTTGCACTCTTACAATTTTTTTTTTATATACAGAATTAGGGTTTATCAAATTCGTCCCTTTTGCTTCTGCCATTGGGGTTTTCTTCAGCTATACTATTGAATTTCAATATAGGAGGTTTTGTGTTCTCGTGTGTGGTTAATTTTGGAGATGAGTGACGCTAAAGAGAACGAGGAAGGAGGGCCGAATGTAACCTTGGCAGTGGAAGAAACTCAGCATTTGGTTGAACTTGAAGGACAGGTTCAATCACAAGATTTGGCCATTCCTTTGTCCACAGGGGATACTTCAAATCGTGTTGAAAATGGGAAGGTAGAGGTAGAGAAACTTGTAGAGGATAAAATTGTGAAACCAGAAGTCAATTCAGAGTGCATTCCTCAACAAGATGTGGTAGATAGTGAAAATGCAACTCAATTCGTCCCTGTAATGAACAATGATCAAGTTTTAAATAAAGCCGAGGTTGAGTATGCAGCAGATGTGAAGAGCAAAGCTGAAGAAGTTCTGCAGTGTGATGAGGGCATCGAGAATGATGCTAATGTTTGTCAAAACAATGGTGATACTACTGAAATGACTGAGAAGGTGAAGCCTAAAGCTTTTGAAGTGGTTGATAGTAAATCTTGTGAGGACTCCAACTCCATATGCCCTAGTCATAATGAGCCTAAAACACCACAAGCGGTTCCCACTGATATAAGAGCTGAAATCAAGAGTGGATTAGACAATGAGAATAAAGTTAATGAAAAGCAGGCTGTTGCTGCTCATGCAGATAATGGAAATTCAATCCCACATAACTTGTGCTTTTTGGATCCTGACGATTCGTATGATGGTAATGAGTCAGGAACAGAAGAGGAACAATCGGCTTTTATGAAGGAGCTTGAAAATTTCTTTAGGGAGAGGAGCATGGAATTCAAACCACCCAAGTTCTATAAAGAGGAACTTAATTGCCTTAAGTTGTGGAGATCCGTAAACAGATTGGGCGGCTATGATAAGGTTACCTCATGTAAATTATGGCGACAAGTGGGAGAGTCTTTCAAACCTCCCAAGACATGCACCACAGTTTCATGGACTTTTCGGGTTTTTTATGAGAAGGCACTTCTTGACTATGAAAGGCATAAAATAAAAGGTGGTGAGCTGAATGTACCTGTTACTTCTCATACAGAACCAATAAGTATTGAAACTCAGTGTGTCCAGGGTTCAGCATCAGGTAGGGCACGGAGAGATGCTGCAGCAAGGGCTATGCAGGGCTGGCACTCACAACGCCTCCTTGGAAATGGTGAAGTTAGTGATCCTATTATTAAGGATAGGAGTTCTTTGTCTATGCAAAAGCGTGAAAAGCAGCTAAAAAGCATCAATTTACTTAAACGCAAGAAATCATCCGATGTGGTTAATGCAGTCAAAGCCGCACACAGTAAACCATCAAGACCACAGTTAAGACACATGTTACTTCACATATCTTTTTATCATGAGTGTGTTGTAACACTTGTGCTTAATTTCTTAATATAA 1500 0.4007 MSDAKENEEGGPNVTLAVEETQHLVELEGQVQSQDLAIPLSTGDTSNRVENGKVEVEKLVEDKIVKPEVNSECIPQQDVVDSENATQFVPVMNNDQVLNKAEVEYAADVKSKAEEVLQCDEGIENDANVCQNNGDTTEMTEKVKPKAFEVVDSKSCEDSNSICPSHNEPKTPQAVPTDIRAEIKSGLDNENKVNEKQAVAAHADNGNSIPHNLCFLDPDDSYDGNESGTEEEQSAFMKELENFFRERSMEFKPPKFYKEELNCLKLWRSVNRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRVFYEKALLDYERHKIKGGELNVPVTSHTEPISIETQCVQGSASGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDRSSLSMQKREKQLKSINLLKRKKSSDVVNAVKAAHSKPSRPQLRHMLLHISFYHECVVTLVLNFLI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02047 448 SUPERFAMILY ARID-like 225 332 IPR036431 GO:0003677
Pste7g02047 448 CDD ARID 232 317 - -
Pste7g02047 448 Pfam ARID/BRIGHT DNA binding domain 233 317 IPR001606 GO:0003677
Pste7g02047 448 Gene3D - 230 328 IPR036431 GO:0003677
Pste7g02047 448 ProSiteProfiles ARID domain profile. 230 321 IPR001606 GO:0003677
Pste7g02047 448 SMART ARID_2 227 317 - -
Pste7g02047 448 FunFam AT-rich interactive domain-containing protein 3 230 329 - -
Pste7g02047 448 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 120 423 IPR045147 GO:0006357
Pste7g02047 448 SMART bright_3 231 322 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02047 Pste-Chr7 18772046 18778277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02047 225 409 ARID Transcription Factor Family AT1G76510 58.824 1.03e-65 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pste7g02047 ARID 1.7e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03474 1 16193207 16200510 Pste7g02047 7 18772046 18778277 PCT