Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02046 ATGTGGTGGGCTAGATTGGATACATCTGTGGTTGACGTTGGACCTCCTGCCGATTGGGTAAAAATCAATGTGCAAAAAACTAAAGATTGTTTTGAGGTCTATGCTTTAGTTCCTGGCCTTCTGCGGGAAGAGGTGCGTGTTCAATCAGACCCAGCTGGACGCTTGGTCATAAGTGGTGAACCAGAGCAAGCTGACAATCCATGGGGGGTGACACCTTTCAAGAAGATTGTCAGCCTGCCTTCAAGAATTGATACTAATCAGACTTCAGCTGTAGTGACCTTACATGGACAATTGTTTGTTCGAGTTCCATTTGAGCAATCAGAATAGAGAAGGCTGATAGATTCATGACGAATTAATTTATATCATGGTTTATAGGATAGTAGGGCCCTAAAGCCAAATTCGTGCTATATTCTACTAACTGTGAGTTATGTTAATAATATTTCATTTAAATTTTTCACTGGATTTTCTCTAGTAAAGAGTTTCAATTTTAACCATGTTAATATATCAACTAGAGGAGATATAAGGTGGG 529 0.3951 MWWARLDTSVVDVGPPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEQADNPWGVTPFKKIVSLPSRIDTNQTSAVVTLHGQLFVRVPFEQSE 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02046 108 SUPERFAMILY HSP20-like chaperones 17 104 IPR008978 -
Pste7g02046 108 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 6 107 IPR045147 GO:0006357
Pste7g02046 108 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 8 108 IPR002068 -
Pste7g02046 108 FunFam AT-rich interactive domain-containing protein 3 3 108 - -
Pste7g02046 108 Gene3D - 6 108 IPR008978 -
Pste7g02046 108 Pfam Hsp20/alpha crystallin family 25 107 IPR002068 -
Pste7g02046 108 CDD ACD_sHsps-like 23 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02046 Pste-Chr7 18769978 18771940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02046 10 106 ARID Transcription Factor Family AT1G76510 81.443 3.77e-55 175