Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02032 ATGAACAACTGTTGCTTGACGCCTCTCCCAGGAGCCTCCAGCCTAAAACATCACTTTGCCTCTCTCAGCCTCTTGAAACAGAAACGAAACAGATTTTTCTCTCTCTCCTCAATGGACACTCCCCATTCGCTTTCTCCCTCTTCCTCCTCCGACGGCCTCACTTTCGAGACGGAGGAGCCCAGGACGCCGTTGGCCGTACGCCGTGCCCTCCAGCTCCTCCACTCCACCGACCCCGACCTCCGCCTCCAAGCCGCTCGCGACATCCGCCGCCTCACCAAAACTTCCCAACGTTGTCGCCGCCAGTTATCCGAAGCTGTCGGTCCACTCGTTTCCATGCTCCGAGTTGACTCGCCCGACTCACACGAACACGCCCTCCTCGCCTTGCTCAACCTCGCCGTCAAAGACGAAAAGTACCCTCCCTCTTCTTCTGCCACCCCACTTCTAATTACTGATTACTCCTTTTCCCCTAAATTAAATCTGAATAAAATCAATATTGTGGAGGCTGGTGCATTAGAACCGATAGTTAGTTTCCTCAAGTCTCAAAATATAAATCTGCGGGAGTCTGCTACTGCATCTTTGCTCACACTATCTGCCTCTTCAAGCAACAAACCAATTATTAGTGCTTGTGGTGCCATTCCTCTTCTTGTGGAGATCCTTAGAGATGGAAGCTCCCAAGCTAAAGCTGATGCTGTAATGGCTCTCTCTAATTTATCAACACACCCTACTAATCCCAGCATCATTCTTCAGACAAAACCAATCCCGTTTATAGTTGATCTTCTAAAAACCTGTAAAAAATCCTCAAAAACAGCTGAAAAATGCTGTGCTTTGATAGAATCCTTGGTGGATTATGATGAGGGCAGAACTGCATTAACATCTGAAGAAGGTGGAGTTCTTGCTGTTGTGGAAGCTCTCGAAAGCGGCACTCTCCAAAGTAGGGAGCATGCTGTTGGAGCACTGTTGACAATGTGCCAAAGCGATCGATGTAAATATAGGGAACCAATACTTAGAGAAGGTGTCATTCCAGGACTTCTTGAGCTTACTGTTCAAGGAACACCCAAGTCTCAGGCAAAAGCACGCACCCTTTTGCAGTTACTGAGAGAATCCCCTTATCCGAGATCTGAAATTCAACCTGACACTCTTGACAATATAGTATGCAACATCATATCTCAGATTGATGGGGATGATCAATCTGGTAAAGCAAAGAAGATGCTGGCTGAGATGGTCCAAGTCAGCATGGAACAGAGTCTGAGACATTTACAGCAAAGGGCTCTTGTTTGCACCCCAAGTGATCTTCCTATAGCTGGCTGTGCTTCTGAAGTGTCTTCAAAATGATAGTGCCGCTGGCCAACTCTGTCTTTCTTCACCTTTCTCCACAATTCTTTTTCTGTCTTTGCACTTGGGGTTTGTGAGGTAAATTTCCATAGTAGAAAACGAAAAAAAGAGAGGAATAATACATAGTGAAGTATGCCAGTCCAGGCCATTGTGGAGGTATCGAGTGACTGGTAATTGTCAATAAACTAAGTTGTCGGTGGAATAGAGCATGATTTTGTAGTTGGTTTGTAAAGAAACTGTTGTATAAAATGACATACAAGTATTAAAAGCTCGTTGTCCAAAATTGTAACTGTTCTCCATTTCTGCAATGACTTGCAGCTAGTTTGGTTTAA 1664 0.4555 MNNCCLTPLPGASSLKHHFASLSLLKQKRNRFFSLSSMDTPHSLSPSSSSDGLTFETEEPRTPLAVRRALQLLHSTDPDLRLQAARDIRRLTKTSQRCRRQLSEAVGPLVSMLRVDSPDSHEHALLALLNLAVKDEKYPPSSSATPLLITDYSFSPKLNLNKINIVEAGALEPIVSFLKSQNINLRESATASLLTLSASSSNKPIISACGAIPLLVEILRDGSSQAKADAVMALSNLSTHPTNPSIILQTKPIPFIVDLLKTCKKSSKTAEKCCALIESLVDYDEGRTALTSEEGGVLAVVEALESGTLQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQAKARTLLQLLRESPYPRSEIQPDTLDNIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDLPIAGCASEVSSK 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02032 443 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 210 250 IPR000225 GO:0005515
Pste7g02032 443 MobiDBLite consensus disorder prediction 38 56 - -
Pste7g02032 443 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 169 211 IPR000225 GO:0005515
Pste7g02032 443 PANTHER U BOX DOMAIN-CONTAINING 49 371 - -
Pste7g02032 443 Pfam Armadillo/beta-catenin-like repeat 161 196 IPR000225 GO:0005515
Pste7g02032 443 Gene3D - 50 425 IPR011989 -
Pste7g02032 443 MobiDBLite consensus disorder prediction 38 57 - -
Pste7g02032 443 FunFam U-box domain-containing protein 4 153 425 - -
Pste7g02032 443 SMART arm_5 284 324 IPR000225 GO:0005515
Pste7g02032 443 SMART arm_5 199 239 IPR000225 GO:0005515
Pste7g02032 443 SMART arm_5 94 133 IPR000225 GO:0005515
Pste7g02032 443 SMART arm_5 158 198 IPR000225 GO:0005515
Pste7g02032 443 SMART arm_5 240 282 IPR000225 GO:0005515
Pste7g02032 443 SUPERFAMILY ARM repeat 66 393 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02032 Pste-Chr7 18669234 18673257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02032 66 366 U-box Gene Family AT2G23140 31.023 1.93e-36 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02032 7 18669234 18673257 Pste7g02032 7 18669234 18673257 ECH
Pste7g02032 7 18669234 18673257 Pste8g01436 8 7855303 7859516 PCT