Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02022 CGCCGATCGCGCTTTCTATAAAGCGCCAGCCACCGCAACACGCTCTACTCACTCGACTTCTCTCTCTCGCCATGGACGATGAGGTGCGCAAGATCTTCAACAAGTTCGACAAGAACGGCGACGGCAAGATCTCGTGCACGGAGCTCAAGGACATGATGGCCGCGCTCGGTTCCAAAACCACCTCCGACGAGCTCAAGCGCATGATGGCGGAGCTCGACCGAAACGGCGACGGCTACATTGACTTGAAGGAGTTCGGCGAGTTCCATTGCGGCGGCGGCGGCGGCGGCGACGGCAGGGAGCTCCGGGAGGCCTTCGAGCTGTACGATCTGGACAAGAACGGCCTGATCTCCGCCAAGGAACTCCACTCCGTCATGCGGAGGCTGGGGGAGAAGTGCTCCCTCAGCGACTGCCGGAGAATGATCGGAAACGTCGATGCGGACGGCGACGGCAGCTGTTGTGGTTTCTTTGTCACGTTTCGTGATTTCTTCCTGCTTCATGATGAGAAGTGGTGGCAATATTTTCTTCACCAGCTCGATTTACGATTTCGTTGACATCTTCTACATCTTGAAAACGCCCCTCAAAATTCTCGTACATTTATGTAATGAAACTGAACAAACTGATTACAGTTTCGTAAGGGTAGCTATTGAAATAGACAAAATATTTGAAAGCATATTATTAGTGTCACAAGGAGAAATCCACATCTAGAAATACAGATAACAAAACTAGGCAGAGGATCATTATCAGGCATAACACAACACACTTTCTTTTTTGCCTAATAATTCATGCATTGCAATTCTTATGCTCAGTCCAACACGACAGATTCGCAACTTTAATCTCATACTCGCGTTGTACTTATATATATATATATATGTATCTATACTTATATATGCAACCGGAA 898 0.4822 MDDEVRKIFNKFDKNGDGKISCTELKDMMAALGSKTTSDELKRMMAELDRNGDGYIDLKEFGEFHCGGGGGGDGRELREAFELYDLDKNGLISAKELHSVMRRLGEKCSLSDCRRMIGNVDADGDGSCCGFFVTFRDFFLLHDEKWWQYFLHQLDLRFR 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02022 159 ProSitePatterns EF-hand calcium-binding domain. 13 25 IPR018247 -
Pste7g02022 159 CDD EFh 76 138 IPR002048 GO:0005509
Pste7g02022 159 CDD EFh 4 61 IPR002048 GO:0005509
Pste7g02022 159 ProSitePatterns EF-hand calcium-binding domain. 49 61 IPR018247 -
Pste7g02022 159 FunFam Calmodulin A 1 66 - -
Pste7g02022 159 FunFam Calmodulin A 71 139 - -
Pste7g02022 159 Pfam EF-hand domain pair 4 62 IPR002048 GO:0005509
Pste7g02022 159 Pfam EF-hand domain pair 76 138 IPR002048 GO:0005509
Pste7g02022 159 ProSiteProfiles EF-hand calcium-binding domain profile. 36 71 IPR002048 GO:0005509
Pste7g02022 159 ProSiteProfiles EF-hand calcium-binding domain profile. 72 107 IPR002048 GO:0005509
Pste7g02022 159 ProSitePatterns EF-hand calcium-binding domain. 85 97 IPR018247 -
Pste7g02022 159 SUPERFAMILY EF-hand 3 146 IPR011992 -
Pste7g02022 159 Gene3D - 73 144 - -
Pste7g02022 159 SMART efh_1 76 104 IPR002048 GO:0005509
Pste7g02022 159 SMART efh_1 40 68 IPR002048 GO:0005509
Pste7g02022 159 SMART efh_1 4 32 IPR002048 GO:0005509
Pste7g02022 159 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 76 137 - -
Pste7g02022 159 Gene3D - 1 67 - -
Pste7g02022 159 ProSiteProfiles EF-hand calcium-binding domain profile. 1 35 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02022 Pste-Chr7 18572361 18574316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02022 3 142 EF-hand Containing Proteins AT1G66400 50.350 3.21e-44 141