Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g02001 ATATATCAACATTAACTGGAAGTCTTGAACCCTCCAGTTTTGGGGGATCAATTCCAAGTAGACTTTGTTGGCATTTGAATTTTGCTCAACAAAAAATGGGAAGGCAACCTTGCTGTGACAAAGTGGGGTTGAAGAAGGGGCCTTGGACTGCAGAGGAGGATAAGAAACTCATTGCCTTCATCCTCACTAATGGTCAATGTTGCTGGAGGGCTGTCCCTAAACTAGCAGGGCTGTTAAGGTGTGGCAAAAGTTGCAGGCTCAGATGGACAAATTACCTCAGGCCAGACCTAAAGAGGGGCCTTCTATCAGAATATGAAGAGAAAATGGTCATTGATCTCCATGCTCAACTTGGCAATAGATGGTCTAAGATTGCTTCTCATCTCCCGGGAAGAACTGATAATGAGATCAAGAACCATTGGAATACCCACATAAAGAAGAAACTCAAGAAAATGGGAATTGACCCTGTTACCCACAAATCACTTGCCAGTGCAACTGAGCAAACTCAAGTCCAACCAGATCAACAATCCCATCAACCGCTGCAAGAACCACCAGAACAAGAGCAATCTACCCCAGTTGAGCGGGACCCCAAATTTGAACCAGGAGATGAGAAATATAAGGAGACAGAGAAGCCAGAGACTTCAATTGAATCAACAACCGTAACTGAAGAAGCTAAGGAGAATGAGCAAATCATGACACCCATATTTGACTCACTGAAACTAATGAATGAGTTCTGCACTGATGAAGTTCCCATAATAGAACCCAATGAGATTCTAGTCCCCTCTGCTCCTTACACTTCACCAACCACTACTTCATCTTCAACAACATCATCATCTTCTTATTCAAATTCATCCAACTTCCTTGAAGACCTGCTGCTCCAAGATTTTGAGTGGTCGGATGATTACAATGATGCTAATATTGACAACAACAATAGCAGTATGGCCTTGTGGGATGATGATTTTATTAGAAGTTGGAATTTGCTTATTAATGATGATGGTGATGGTGACAGAAAGCAAGTGTTTGAAGCTCCTGTCAATCAGTACCAAAGAGTGATCATGGATTCAGAATCTTGGGCATATGGGTTGTTTTGATGCAATATTTTTTCTCCCCAATGCTTACTTGTAATGTGCTTGTAAGTTGTTGCAAACAATAAAAAGTAAATCAGGATTCAATCAGAATCACAACTCCTTATTTATATTATCCACTTTTTTGTTCCCAAAACTTTTCACCTTATAATAAAGGGGAAAGACATTTGTATATGGTAGTACAAAGGTGTTGATTTGTTGCTGCTGATCAAGGCATACTTGGTACACTGGAAACTTTGAATTGAGG 1329 0.4056 MGRQPCCDKVGLKKGPWTAEEDKKLIAFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKSLASATEQTQVQPDQQSHQPLQEPPEQEQSTPVERDPKFEPGDEKYKETEKPETSIESTTVTEEAKENEQIMTPIFDSLKLMNEFCTDEVPIIEPNEILVPSAPYTSPTTTSSSTTSSSSYSNSSNFLEDLLLQDFEWSDDYNDANIDNNNSSMALWDDDFIRSWNLLINDDGDGDRKQVFEAPVNQYQRVIMDSESWAYGLF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g02001 330 Gene3D - 11 67 - -
Pste7g02001 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pste7g02001 330 MobiDBLite consensus disorder prediction 156 181 - -
Pste7g02001 330 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste7g02001 330 MobiDBLite consensus disorder prediction 227 249 - -
Pste7g02001 330 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste7g02001 330 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Pste7g02001 330 CDD SANT 16 61 IPR001005 -
Pste7g02001 330 MobiDBLite consensus disorder prediction 131 155 - -
Pste7g02001 330 FunFam MYB transcription factor 11 67 - -
Pste7g02001 330 Gene3D - 70 154 - -
Pste7g02001 330 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pste7g02001 330 PANTHER F14D16.11-RELATED 1 274 - -
Pste7g02001 330 MobiDBLite consensus disorder prediction 131 196 - -
Pste7g02001 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste7g02001 330 SMART sant 66 114 IPR001005 -
Pste7g02001 330 SMART sant 13 63 IPR001005 -
Pste7g02001 330 CDD SANT 74 112 IPR001005 -
Pste7g02001 330 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste7g02001 330 FunFam Myb transcription factor 71 133 - -
Pste7g02001 330 MobiDBLite consensus disorder prediction 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g02001 Pste-Chr7 18325271 18327667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g02001 1 330 MYB Transcription Factor Family AT5G16600 45.504 4.39e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste7g02001 Myb_DNA-binding 2.2e-12 CL0123