Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01990 TGTAAGTGTAGTCCCGATATTGACGCCACTTCTAGTGTCGTTTTTGGCTTTATACTACAAAAGCAAACTCAAGAAAGAAAAAGCAATTCCATTACCAATAACATCCCCAGGTGAATCATGAATAACCTTCATTTTTTTTATGAACATCATTCTCACTCTCTCCAACACCAGATATAAATTTTCCTTTTAAGATCTACCCTTTTTCCCATAGTTTTGTCTACTTCAAAATCTACTAAGGTCTTGCACTACTGATTAAAGTTGATTCCTTTTTCTTCTGGGGGTATATGTAAAGTTGATATTTTTCTTCTCAAATTGAATGAGACAGAAGGTTTTCTGGACCACTTTGCTGCTAAATATAGATGTCAGCTGCTAGACTGTGAATCAAACTTCAGCAGTGTGATTGATATTGGTTTTCCAAAGGGCAACTGCAACCATGATTGGAGTTTGGCTTGTAGTGTTGATGGTTCTCTCCAAAGGGTTGTCTTCAACTGGAGTTGAAATGGATAATTCCACAATACCTGCTTTCGTAAATATTGGGGTTCTCTATTCTTTCAATACCAGTGTTGGTAAAATGGTGAAAACTGCGGTACTGGCTGCAGTTGATGATGTAAATTCTGATCCATCTATTCTTGCTAATACTAAGTTGCATGCCTCACTGCAAGAAGATACCAAATACAGAGGTTTTTTGAGCATTGCTGAGGCCTTGCAGCTCATGGCGACACAAACTGTGGCTATAATTGGCCCCCAGACCTCTACAACAGCTCATGTCATATCTCATATAGCGAATGAGCTCCAAGTTCCCTTGCTATCATTTACAGCAACTGATCCTACCCTTTCTTCTCTTCAATTTCCGTTCTTTATTAGAACTGCTTTTAGTTCTATATATGAAATGACTGCAATAGCAGATCTTGTTAACTACTATGGATGGAGAGAGGTTATTGCAGTTTATGGTGATGATGACCATGGGAGGAATGGAATGAGTGCTTTGGGGGATAAGCTTGCTGAGAGACGTTGCAAGATCTCATTTAAAGCACCTATGACTCCTGAGGCAACTAGGGAGGAGATTACTGATGTGCTTGTTCAGGTGGCCTTGGCAGAATCCCGGGTTATAGTTCTTCACACAAGTACAGCTTGGGGCCCAAAAGTGTTAAGTGTGGCAAAGTCTCTGGGGATGATGGAAAATGGTTATGTCTGGATAACAACTACTTTTCTGTCTACTTGGCTGGATATAAGTAGTCCCCTATCTCCAGATGCAACAGATGACATGCAAGGTGTCATTACGGTACGAATGTACATACCAGATTCAAAGCTCAAAAGATGGTTTGTTTCTAGGTGGAAAAACTTGACTACTGGAAAGATGGCTAATGGTTCTCTTGGTTTGAGTACATATGGTATCTTTGCATATGATACTGTTTATGCTCTTGCTCATGCACTTGATGCATTTTTCAAGCAAGGGAACCGAATTACATTTTCACAGGATCCAAAGTTAACTCAACTACGCGGAGACAACATGCATCTTGATGCTGTGAAAATCTTCAATGAAGGAAATCTGTTGCGTAAAAATATTTATGCCGTTAACATGACTGGTGTATCAGGTCTATTCAAGTATACATCTGATGGAAACCTTGTTAATCCTGCATATGAAATCATCAATGTGATTGGAACAGGGACTCGGAGGATTGGTTATTGGTCTAATTACACTGGATTATCAATTGTTCCTCCTGAAGCACTTTATTCAAAACCACCTAATCGATCCATTGCAAGCCAAAAGCTACTCCCTGTTTTGTGGCCAGGTGAAACAACCCAGAAGCCTCGTGGTTGGGTTTTTCCAAACAATGGAAGGATGTTAAAAATTGGAGTGCCAAAAAGGGTTAGCTACCGAGACTTTGTCTCTCAGGTACAAGGCACTGACATGTTCAAGGGATTCTGCATTGATGTATTTCTTTCTGCAGTCAACTTGTTGCCCTATGCTGTCCCCTATAAATTTGTTGCGTATGGGGATGGTGACAGCAATCCTAGTAACACTGAACTTGTCCGTCTTATCACAGCGGGTGTTTTTGATGCTGCAGTAGGTGACATTACAATTACTACAGAAAGAACAAAGATGGTGGATTTTACACAGCCATATATTGAGTCTGGTCTAGTGGTAGTAGCATCAGTTAAGAAGACAGATTCCAATGCCTGGGCATTTTTGACACCATTTACACCTATGATGTGGACTGTCACAGCTATCTTTTTTCTACTAGTCGGAGCTGTTGTTTGGATTTTAGAACATAGGCTGAATGATGATTTCAGGGGATCTCCCAAACAACAAATGATCACAATTTTATGGTTTAGTTTTTCAACCATGTTCTTTGCTCACAGGGAAAATACAGTGAGCACTCTTGGTCGCTTTGTGCTGCTTATATGGTTATTTGTAGTTCTGATAATTAACTCAAGTTACACAGCTAGCCTGACATCAATCCTCACAGTGCAACAACTTTCTTCACCTGTTAAAGGCATTGAGAGTTTAATAAATAGCAAAGAGCCTATTGGCTACTTGCAGGGTTCGTTTACTAGAGCTTATTTGATTGGAGAAATTGGTATTGATGAATCCAGACTAGTTCCTCTAAAAACACCAGAAGAAACTGCAAAAGCACTAGAAAAAGGTGCCCAGAAGGGTGGTGTTGCTGCATATGTTGATGAGCGTGCTTACATAGAGCTTTTCCTTTCAAGCCGGTGTGCTTTCAGCATTGTAGGTCAAGAGTTCACTCGAAATGGTTGGGGATTTGCTTTTCCACGAGACTCGCCGTTAGCAGTTGACCTTTCAACTGCCATATTGGAGTTGGCAGAGAATGGAGACTTACAAAGGATCCATGACAAATGGCTTTTGAGCAGTGCTTGCCTATCACAAGGTGCAAAGCTTGAAGTGGACAGACTTAAGCTAAAAAGCTTCTGGGGCCTCTATCTGGTGTGTGGGTTGGCATGTGTGCTTGCTCTCTTCATATATCTTGTTCAGACCATGAGGCAGTACTTCAAGCATGGTCCTGAAGAGCTCGAGTCTTCAGGCCATGGCTCAGGATCTTCGCGTCTGCGAACATTTCTTTCCTTTGTAGATGAAAAGGAAGAGATAGTTAAGAGCCGCTCCAAGAGAAAGAAAGTGGAGGGCATGTCATACAGAAGCTCAAGTGAGATTGGAACATCCATCACCTCCAACAAAGCATATTCTCAGGCATCATCAAACAGAATTGATGCAGCTAATGAAATCTAACTGTTGCATATTTATTTGGTCCTCATAATTTTGCAGCCTCTTGTACTAACTAAAGTGCCTCACCCTTCCTTCTTCACTCCCTAATCCCTATTGCAACTGTTAGGTTCCAGCTACATTTTTGCTTTCAGTACATATAAGTGTAAGATATATCAGTTTGTGTGGGACTGTAATCTGAGCGTGGGGACAAGGTGGCTTTGCAATTTTTGTTCGTACTTATGGTTTGTGTAGGATACATAATATTGAAT 3495 0.4077 MIGVWLVVLMVLSKGLSSTGVEMDNSTIPAFVNIGVLYSFNTSVGKMVKTAVLAAVDDVNSDPSILANTKLHASLQEDTKYRGFLSIAEALQLMATQTVAIIGPQTSTTAHVISHIANELQVPLLSFTATDPTLSSLQFPFFIRTAFSSIYEMTAIADLVNYYGWREVIAVYGDDDHGRNGMSALGDKLAERRCKISFKAPMTPEATREEITDVLVQVALAESRVIVLHTSTAWGPKVLSVAKSLGMMENGYVWITTTFLSTWLDISSPLSPDATDDMQGVITVRMYIPDSKLKRWFVSRWKNLTTGKMANGSLGLSTYGIFAYDTVYALAHALDAFFKQGNRITFSQDPKLTQLRGDNMHLDAVKIFNEGNLLRKNIYAVNMTGVSGLFKYTSDGNLVNPAYEIINVIGTGTRRIGYWSNYTGLSIVPPEALYSKPPNRSIASQKLLPVLWPGETTQKPRGWVFPNNGRMLKIGVPKRVSYRDFVSQVQGTDMFKGFCIDVFLSAVNLLPYAVPYKFVAYGDGDSNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVASVKKTDSNAWAFLTPFTPMMWTVTAIFFLLVGAVVWILEHRLNDDFRGSPKQQMITILWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPVKGIESLINSKEPIGYLQGSFTRAYLIGEIGIDESRLVPLKTPEETAKALEKGAQKGGVAAYVDERAYIELFLSSRCAFSIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLSSACLSQGAKLEVDRLKLKSFWGLYLVCGLACVLALFIYLVQTMRQYFKHGPEELESSGHGSGSSRLRTFLSFVDEKEEIVKSRSKRKKVEGMSYRSSSEIGTSITSNKAYSQASSNRIDAANEI 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01990 938 CDD GluR_Plant 470 812 - -
Pste7g01990 938 Gene3D - 148 425 - -
Pste7g01990 938 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Pste7g01990 938 Pfam Ligand-gated ion channel 813 845 IPR001320 GO:0015276|GO:0016020
Pste7g01990 938 Gene3D - 707 815 - -
Pste7g01990 938 FunFam Glutamate receptor 583 713 - -
Pste7g01990 938 FunFam Glutamate receptor 148 299 - -
Pste7g01990 938 Gene3D - 472 582 - -
Pste7g01990 938 Pfam Bacterial extracellular solute-binding proteins, family 3 529 812 IPR001638 -
Pste7g01990 938 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 891 IPR015683 -
Pste7g01990 938 PIRSF IGluLR_plant 1 937 IPR017103 -
Pste7g01990 938 SUPERFAMILY Periplasmic binding protein-like II 447 814 - -
Pste7g01990 938 SUPERFAMILY Periplasmic binding protein-like I 29 464 IPR028082 -
Pste7g01990 938 Gene3D - 583 706 - -
Pste7g01990 938 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
Pste7g01990 938 Pfam Receptor family ligand binding region 48 410 IPR001828 -
Pste7g01990 938 FunFam Glutamate receptor 467 583 - -
Pste7g01990 938 FunFam Glutamate receptor 709 816 - -
Pste7g01990 938 Gene3D - 50 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01990 Pste-Chr7 18177330 18182162 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01990 5 913 Ion Channels AT3G51480 59.101 0.0 1137