Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01985 TTTACAGTAATACAACATGAGCAAAGTTTGGCTTCTTGTCCTTGTCATCTACTCTGGGTTTCCCTCAAAAGGAACCAGTAATGCTATGACTACTACAAGACCGAGTGTAGTTAACATTGGGGCAATTTTATCTTTCAACTCAACAGTTGGAAGAGTGGCTAAAGTTGCCATACGAGCAGCAGTGGATGATGTAAATTCCAATCCAGCAATTCTCAATGGAACTAAGCTCAATATTTCGATGCTGGACACAAAATTATCCACTGGATTCCTAGGAATCATTCATTCACTTCTGCTGATGGAGAGTGACACTGTGGCCATAATTGGTCCTCAATACTCAGTCATGGCACATGTGATTTCACATATAGCAAACGAGATGCAAGTGCCTCTACTTTCATTTGCAGCAACAGACCCTACACTGACTTCATTGCAGTTCCCATATTTTGTTAGGACAACACAGAGTGATCTGCATCAGATGGCCGCCGTGGCAGAAATTGTTGATCACTTTCAATGGAGAAATGTTATAGTCATTTACGTTGATGATGATCATGGAAGAAATGGGCTAGGTGCCTTAGGAGATAAGCTAGCAGAGAAACGTTGTAAAATATCACATAAGGTACCCTTTAGGCCATATAATATAACCCGAGAAGAAATAAACAATCAATTAGTTAAGGTAGCTTTAATGGAATCAAGGTTAATAGTCCTTTACATATACCCTTCTTTTGGTCTAGAAGTTTTTCATGTAGCTGAATCACTTGGTATGATGGGAAGTGGTTATGTGTGGATAGCCACAGATTGGCTTTCTACACTACTAAATTCAGAATCATCCTTGTCCACATCTCTAGCCATGAATGACATCCAAGGTGTCATCACCTTGCGGATGCATACACCAGAATCAGAAAGAAAACAAAAGTTTATTTCTAGGTGGAACAAACTGAGTCTGAAAGAAGATCCTAATCAGGAGCCTTTAGGGTTAAATATCTTTGGTCTATATGCATATGACACTGTTTGGGTACTTGCTCATGCACTTGATACACTTTTAAAGAATGGAGGAACTTTGTCATTTACAAATGAGTCAAGTCCAAACACATTAAAGAGTAATACCCTTCACCTAGATAGAATAGGGGTCTTTAATAATGGTAGCATGTTGCTTAAAAAGATTTTAGATGTCAACGCAACTGGTTTAACAGGCCCAATAAAGTTTGACTCAGATGGCAATCTAATGCATCCATCATATGAAATCCTTAATGTAATAGGAACTGGAAGTAGGAGGATTGGTTATTGGTCTAAAACCTTTGGCCTCCACACTGGGGAAGCTCCTAATCATTCCAATTCTAGTCAAGGACTATATGGTGTCATCTGGCCTGGTCAAACAACTCAAACGCCACGTGGTTGGAGTTTTGCTAGCAATGGAAGACAATTGAGAATTGGGGTTGTTCTTGATGTTAATTTCCGTGAGTTTTTGACAAGAAATGAGGACACCGAAATGTTTAGTGGCTATTGTATAGATGTGTTTACTGCTGCAATCAACTTGTTGCCTTACCCGGTACCATTCAAGTTTATTCCATTTGGTGATGGTAAAACCAATCCATCAGTTGCACACATGCTTCACCTTGTCACCATTGGTGCCTTAGATGCTGTGGTAGGAGAAATTACCATTACTACACACCGAGCTAAGATAGTGGATTTTACGCAGCCATATATTGAGTCTGGACTAGTTGTTGTGGCACCTATAAGGAAGATGAAATCCAGTGCTTTTGCTTTCCTGAGACCATTCACTCCAATGATGTGGTTTGTGACAAGCATGTTTTTCTTAGTTGTGGGAACTGTTGTGTGGATTTTAGAGCGTCGCACAAATGATGATTTTAGAGGCCCCGCTAGAAGACAAGTAGTCACCATTATATGGTTTAGCTTCTCAACCCTGTTTTCCACACATAGAGAAAGCATTGTCAGCACACTTGGTCGTTTAGTGTTAATCATATGGTTGTTTGTGGTTTTGATACTCAACTCAAGCTATACTGCAAGCCTCACCTCCATCCTAACTGTGGAACAACTCACTTCCTCAGTTAAAGGAATTGAAAGCTTACTAGCAAGCAACGACCCCATTGGTTTCCAAAGGGGTTCATTTGCTGAAAATTATTTGACTGAGGAGCTCAACATACGCAGGTCCAGGCTTGTTCCCCTCAAATCCCTAAAAGAATATGAAAAAGCTTTGAAGGATGGACCAGCTAATGGTGGTGTAGCTGCAATAATAGATGAGCGTGCATACATGGAGCTCTTCCTAGAAACCAGATGTGAATTTAGTATTGTTGGTCGAGAGTTCACCAAGAACGGATGGGGTTTTGGCTTCCCAAAGGAATCCCCCCTAGCGATTGACACGTCAAATGCCATCCTAAAACTATCGGAGAATGGTGAGCTTCAGAGAATTCGTGACAAATGGATAACAAGAAGTGCTTGCAGCTCAGAGGGTGCAAAACAAAGTGTTGACCGACTTGAGCTGAGAAGCTTTTCGGGTTTGTACCTGCTGATTGGTGTAGCCTGCTTCTTTGCTCTCCTTTGCTATCTTACAAGAATGGTATACCATTTCAACAGGCACTCAAATAGAAACTGTGAAGCCTCTTCTTGTCTTCGATCATTCCTTTTCTTTGTCAATAAAAAAGAAGGGGAAGACAACCACAAGCCAAAGGCAAGGCAAAAGGAGAAGTGCTGTTGTAAGGTACTAATGCATGAAGATCGATCTTGTAATGACTCAAGTGTCTGTGTCCATATTGAAAATAATGCCACTTCCTAAAGTTAAGTACCAAATCCCGAACTAAATCTAGGAGCATTTGTAATTTAAATGA 2840 0.4053 MSKVWLLVLVIYSGFPSKGTSNAMTTTRPSVVNIGAILSFNSTVGRVAKVAIRAAVDDVNSNPAILNGTKLNISMLDTKLSTGFLGIIHSLLLMESDTVAIIGPQYSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLHQMAAVAEIVDHFQWRNVIVIYVDDDHGRNGLGALGDKLAEKRCKISHKVPFRPYNITREEINNQLVKVALMESRLIVLYIYPSFGLEVFHVAESLGMMGSGYVWIATDWLSTLLNSESSLSTSLAMNDIQGVITLRMHTPESERKQKFISRWNKLSLKEDPNQEPLGLNIFGLYAYDTVWVLAHALDTLLKNGGTLSFTNESSPNTLKSNTLHLDRIGVFNNGSMLLKKILDVNATGLTGPIKFDSDGNLMHPSYEILNVIGTGSRRIGYWSKTFGLHTGEAPNHSNSSQGLYGVIWPGQTTQTPRGWSFASNGRQLRIGVVLDVNFREFLTRNEDTEMFSGYCIDVFTAAINLLPYPVPFKFIPFGDGKTNPSVAHMLHLVTIGALDAVVGEITITTHRAKIVDFTQPYIESGLVVVAPIRKMKSSAFAFLRPFTPMMWFVTSMFFLVVGTVVWILERRTNDDFRGPARRQVVTIIWFSFSTLFSTHRESIVSTLGRLVLIIWLFVVLILNSSYTASLTSILTVEQLTSSVKGIESLLASNDPIGFQRGSFAENYLTEELNIRRSRLVPLKSLKEYEKALKDGPANGGVAAIIDERAYMELFLETRCEFSIVGREFTKNGWGFGFPKESPLAIDTSNAILKLSENGELQRIRDKWITRSACSSEGAKQSVDRLELRSFSGLYLLIGVACFFALLCYLTRMVYHFNRHSNRNCEASSCLRSFLFFVNKKEGEDNHKPKARQKEKCCCKVLMHEDRSCNDSSVCVHIENNATS 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01985 923 FunFam Glutamate receptor 463 579 - -
Pste7g01985 923 CDD GluR_Plant 466 808 - -
Pste7g01985 923 Pfam Bacterial extracellular solute-binding proteins, family 3 484 808 IPR001638 -
Pste7g01985 923 Gene3D - 50 403 - -
Pste7g01985 923 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Pste7g01985 923 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 106 134 - -
Pste7g01985 923 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 326 338 - -
Pste7g01985 923 Pfam Ligand-gated ion channel 809 841 IPR001320 GO:0015276|GO:0016020
Pste7g01985 923 Pfam Receptor family ligand binding region 50 413 IPR001828 -
Pste7g01985 923 FunFam Glutamate receptor 148 306 - -
Pste7g01985 923 Gene3D - 148 428 - -
Pste7g01985 923 Gene3D - 459 578 - -
Pste7g01985 923 SUPERFAMILY Periplasmic binding protein-like II 443 810 - -
Pste7g01985 923 Gene3D - 579 695 - -
Pste7g01985 923 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 881 IPR015683 -
Pste7g01985 923 Gene3D - 696 812 - -
Pste7g01985 923 FunFam Glutamate receptor 705 812 - -
Pste7g01985 923 CDD PBP1_GABAb_receptor_plant 33 428 IPR044440 -
Pste7g01985 923 FunFam Glutamate receptor 579 709 - -
Pste7g01985 923 PIRSF IGluLR_plant 1 922 IPR017103 -
Pste7g01985 923 SMART GluR_14 469 810 IPR001320 GO:0015276|GO:0016020
Pste7g01985 923 SUPERFAMILY Periplasmic binding protein-like I 28 459 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01985 Pste-Chr7 18146840 18151224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01985 3 914 Ion Channels AT3G51480 54.713 0.0 1020