Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01983 ATTATGATAACAACAAGTTGTTATTAGCTGCCAAAAGGATGAGCAGGGCAACAGGAACTGATTTTAAACTTAGCCTTCTTTTCAATTTTCACTTTGCCTTATCATCCTCCCTACAACTTGATGTTGCACTTTTGTCTAATTTTTTGGGTACCAAATTCACCATATATGACAGTCAAGGTCCCCATGATGGTGTAATTCAATCAAATTGTCAATCTAGTCGGAGATTTCATTCTAAGAAGGTGTCACCAAGAGTTCCAGCTTGTGACTATCTTGTTACCACTGTTTCCTACAAGCTGAATGTCCTCTGCACTAGAGGACCCAGAAGAATGCATTGTGTCATGAACTCTATACCCGTTTCCGCTATTCAAGAAGGGGGCAACGCCCCAACTCCCACATCTTTCCCTCAAATATATGAACCTTTTCATCCATCACCAGCACCAAAAGAAAAACTTATCAGAACCACCATATTGAGTCAAGGCTCAACTGAGCAATTAGTACTGAAAAACAAGGCTCCCAGATGGCATGAGCAACTACAGTGCTGGTGCCTAAACTTCAAGGGTTGTGTTTCAGTGGCTTCTGTTAAGAACTTTCAACTTGTAGCTGTTGTCGAACATATCATAACATTTCTGCTGAGGAACAAGAAAAGGTCATCTTGCAGTTTGGAAAGATTGGAAAAGACATACTCACCGTGGATTACCGATATCCACTCTCTACCTTCCAAGCCTTTGCCATCTGCT 737 0.4125 MSRATGTDFKLSLLFNFHFALSSSLQLDVALLSNFLGTKFTIYDSQGPHDGVIQSNCQSSRRFHSKKVSPRVPACDYLVTTVSYKLNVLCTRGPRRMHCVMNSIPVSAIQEGGNAPTPTSFPQIYEPFHPSPAPKEKLIRTTILSQGSTEQLVLKNKAPRWHEQLQCWCLNFKGCVSVASVKNFQLVAVVEHIITFLLRNKKRSSCSLERLEKTYSPWITDIHSLPSKPLPSA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01983 233 SUPERFAMILY Tubby C-terminal domain-like 30 193 IPR025659 -
Pste7g01983 233 PANTHER TUBBY-RELATED 32 189 - -
Pste7g01983 233 Gene3D Tubby Protein; Chain A 14 214 IPR025659 -
Pste7g01983 233 PRINTS Tubby superfamily signature 154 171 IPR000007 -
Pste7g01983 233 PRINTS Tubby superfamily signature 27 51 IPR000007 -
Pste7g01983 233 PRINTS Tubby superfamily signature 172 188 IPR000007 -
Pste7g01983 233 PRINTS Tubby superfamily signature 76 103 IPR000007 -
Pste7g01983 233 Pfam Tub family 31 188 IPR000007 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01983 Pste-Chr7 18100308 18101126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01983 3 192 TUB Transcription Factor Family AT2G47900 50.254 7.66e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Pste7g01983 Tub 9.8e-47 CL0395