Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01979 AAAATACCAAATGAGCAAAGTGTGGCCTCTAGCTTTCCCTCAAAAGGAACCAGCAATGTTACTACAAGACCAAATGCCATTAACATTGGGGCAATTTTATTCTTCAACTCAACAATTGGCAGAGTGGCTAAAGTTGCCATCCAAGCTGCAGTGGATGATATAAATTCCAATGAAATGATTCTTAATGGAACTGAGCTTAACATCTCAATGCTGGACACCGAATTATCCAATGGATTCCTCGGAATCATTGATTGTATAATATATCTTACTCACCTCCTTGTTGATTTTATATTGCAGCACTTCTGTTGGTGGAAAGTGACACTGGCAATAATTGGTTCAGTCAATGCACATGTGATTGCACCCATAACAAATAAGATGCAAGTGCCTCTACTTTCATTTGCCGCAACAGACCCTTCTCCGACTTCACTCCAGTTCCCATATTTTGTTAGAACAACACACAGTGATCTGTATCAGATGGCTGCTGTGGCAGAAATTGTTTATCACTTCCAATGGAGAGATGTAATAGCCATTTATGTCGATGATGATCATGGAAGAAATGGGGTAGCAGCATTAGGGGATATGCTAGCAGAGAAACGTTGTAAAATATCATATAAAGCTCCTATTAGGCCAGATACTATAACCCGAGAAGAGATAAACATTGCATTAGTTAAGGTAGCTTTAATGAGATCAAGGGTAATAGTTCTTCATATATACTCTTCTTTTGGTTTAGAAGCATTTCATGTGGCTCAATCACTTGGCATGATGCGAAGTGGTTATGTGTGGATAGCCACAGATTGGCTTTCTACAGTACTAGATTCAGAACCATCCTTGTCCTCATCTCGAGTCATGAATCACAGTGTTATCACATTGCGCATGCATACACCAGAGTCAGATATAAAAAAAGAATTTATTTCTAGGTGGAACAAACTAAGCCAAAAAGAAGATCCTAATCGGGATCCTTTTAGGTTAAATAATGGTGGAACTTTGTCATTTTCAAATTATTCAAATCTAAACATGTTAAAGGGGAACGCCCTTCATCTGGATGCTATGAGAGTCTTTGATAATGGTAGCATGTTGCATACAAAAATTTTAGAAGTCAACAAAATCGGTTTAACTGGCCAAATGATGTTTGACTCAGATGGAAATTTAATGCATCCATCATATGAAATTATTAATGTGATAGGCACTGGAATTAGGAAGATTGGTTATTGGTCTCAAACCTCAGGCCTCCACACTGAGGAAGCTCCTAAATATTCCAATTATAGTCAAGGACTTTATGCTGTCATCTGGCCTGGTCAAACAGGTAGAACCCCACGTGGTTGGAGTTTTTCTAGAAATGGAAAAGAATTGAGAATTGGGGTGCTACTTGGGGTTAATTTTCATGAGTTTTCCAGAATGGAAGGCACCAACATGTTTAGTGGTTATTGTATAGATGTATTTACTGCTGCACGAGACTTTCTGCCTTATCCAGTACTATACAAGTTTATTCCATTAGGTGATGGTGAAACAGCCAACCGGTCAAGGGTAGATTTTCTTCACATGATCACAACTGGCGAATTAGATGCTGTGGTGGGGGACATTACTATTACTACACACCGAGCAAAGATGGTGGAGTTTACACAGCCATATATTGAGTCTGGGCTAGTTGTCGTGGCACCTATCAAGAAGTTGAAATCTAGTGCTTGGGCTTTCCTGAGACCATTCACAATAAGAATGTGGTTTGTGACAGGAATGTGTTTCTTAGTAGCTGGGGCTGTTGTGTGGATTTTAGAGCGTCGCATAAATGATGATTTCAGAGGCCCTGCTGGATTACAATTTGTCACTGTTCTCTGGTTTAGCTTTTCAACCTTATTTTTTACACATAGAGAGAACACTGTCACCACACTTGGTCGTTTAGTACTAATCGTATGGCTATTTGTGATTTTGATACTCAACTCAAGCTATACTGCAAGCCTCACCTCCATCCTAACTGTAGAACAGCTCTCATCACCAGTTAAGGGAATTGAAAGCTTAGTAGCAAGTGATGACCAAATTGGTATCCCGAGGGATTCATTTGCTGAAAGTTATCTGATTGAGGAGTTAAACATTGACAGGTCCAGGCTTGTTCATCTCAAATCCTTATCAGATTATGAAAAAGCCTTGAAGGATGGACCAGCTAATGGTGGTGTTGCTGCAATAATAGACGAACAAACCAGATGTGAATTTAGTATTGTTGGTCGAGAGTTCACCAAGATCGGATGGGGTTTTGGCTTTCCAAAGGAATCGCCTCTAGCAGTTGACATGTCAACTGCCATCCCGAAACTATCAGAAAATGGTGAGCTTCAGAGACTTCATGACAAATGGATAACAAAAAGTGCTTGCAGCTCAGAGGGTGCAAAAGAAAGCATAGACCGACTTCATCTGAAAAGCTTTTGGGGTCTGTACATGCTAAGTGGCATAGCATGCTTCATTGCTCTCCTTTGCTATGTTATTAGAATGGTATACCCAAGCAATCAAATATTAACCTTGAAGGCTCATCATGCTCTTCTTGTGTTCGATCATTCATTTCCTTTTGTTAATGAAAAAGAAGGGGAACACAAATACAAGCTAGAGACAAGGCAAAAGGACAACTCTTGTAGAAATGGATCTTTTGACGACTCCAATGTTTGTGTCCATACCAAAAACAGTGCTCCTGCC 2676 0.3984 KIPNEQSVASSFPSKGTSNVTTRPNAINIGAILFFNSTIGRVAKVAIQAAVDDINSNEMILNGTELNISMLDTELSNGFLGIIDCIIYLTHLLVDFILQHFCWWKVTLAIIGSVNAHVIAPITNKMQVPLLSFAATDPSPTSLQFPYFVRTTHSDLYQMAAVAEIVYHFQWRDVIAIYVDDDHGRNGVAALGDMLAEKRCKISYKAPIRPDTITREEINIALVKVALMRSRVIVLHIYSSFGLEAFHVAQSLGMMRSGYVWIATDWLSTVLDSEPSLSSSRVMNHSVITLRMHTPESDIKKEFISRWNKLSQKEDPNRDPFRLNNGGTLSFSNYSNLNMLKGNALHLDAMRVFDNGSMLHTKILEVNKIGLTGQMMFDSDGNLMHPSYEIINVIGTGIRKIGYWSQTSGLHTEEAPKYSNYSQGLYAVIWPGQTGRTPRGWSFSRNGKELRIGVLLGVNFHEFSRMEGTNMFSGYCIDVFTAARDFLPYPVLYKFIPLGDGETANRSRVDFLHMITTGELDAVVGDITITTHRAKMVEFTQPYIESGLVVVAPIKKLKSSAWAFLRPFTIRMWFVTGMCFLVAGAVVWILERRINDDFRGPAGLQFVTVLWFSFSTLFFTHRENTVTTLGRLVLIVWLFVILILNSSYTASLTSILTVEQLSSPVKGIESLVASDDQIGIPRDSFAESYLIEELNIDRSRLVHLKSLSDYEKALKDGPANGGVAAIIDEQTRCEFSIVGREFTKIGWGFGFPKESPLAVDMSTAIPKLSENGELQRLHDKWITKSACSSEGAKESIDRLHLKSFWGLYMLSGIACFIALLCYVIRMVYPSNQILTLKAHHALLVFDHSFPFVNEKEGEHKYKLETRQKDNSCRNGSFDDSNVCVHTKNSAPA 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01979 892 SUPERFAMILY Periplasmic binding protein-like I 23 441 IPR028082 -
Pste7g01979 892 Gene3D - 683 786 - -
Pste7g01979 892 PIRSF IGluLR_plant 323 890 IPR017103 -
Pste7g01979 892 PIRSF IGluLR_plant 7 329 IPR017103 -
Pste7g01979 892 Pfam Ligand-gated ion channel 784 815 IPR001320 GO:0015276|GO:0016020
Pste7g01979 892 Gene3D - 561 680 - -
Pste7g01979 892 Gene3D - 445 560 - -
Pste7g01979 892 Pfam Receptor family ligand binding region 45 395 IPR001828 -
Pste7g01979 892 FunFam Glutamate receptor 561 691 - -
Pste7g01979 892 PRINTS Metabotropic glutamate GPCR signature 139 158 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pste7g01979 892 PRINTS Metabotropic glutamate GPCR signature 158 174 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pste7g01979 892 PRINTS Metabotropic glutamate GPCR signature 174 191 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pste7g01979 892 PRINTS Metabotropic glutamate GPCR signature 55 74 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pste7g01979 892 PRINTS Metabotropic glutamate GPCR signature 107 133 IPR000337 GO:0004930|GO:0007186|GO:0016020
Pste7g01979 892 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 28 854 IPR015683 -
Pste7g01979 892 SMART GluR_14 449 784 IPR001320 GO:0015276|GO:0016020
Pste7g01979 892 Gene3D - 45 385 - -
Pste7g01979 892 FunFam Glutamate receptor 154 311 - -
Pste7g01979 892 Gene3D - 154 410 - -
Pste7g01979 892 SUPERFAMILY Periplasmic binding protein-like II 425 784 - -
Pste7g01979 892 FunFam Glutamate receptor 445 561 - -
Pste7g01979 892 FunFam Glutamate receptor 687 786 - -
Pste7g01979 892 Pfam Bacterial extracellular solute-binding proteins, family 3 463 783 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01979 Pste-Chr7 18069947 18074095 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01979 21 827 Ion Channels AT1G42540 54.438 0.0 889