Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01977 CATAGATTGGCTTTCTACACTACTAGATTCAGATTCTTCCTTGTCCACATCTACAGCAATGAATTACATCCAAGGTGTTATAACCTTGCGCATGCACACACAAAATTCGGACAAAAAACAAAAATTTATTTCTTGGTGGAACAAATTGGGCCAGAAATAAGATCCTTTCGGGCATATGATACTGTTTGGGTACTTGCTTATGCACTTGATTCACTTCTCAAGGATGGAGGAACTTTGTCATTTTCAAACGATTCAAGTCCTAACATGTTAAAGGGGGACACCCTTCACCTCGATAGATTAAGGGTCTTTGTTAATGGTAGCACGCTGCTTAAAAAGATTTTAGAGGTCAACACAACTGGTTTAACAGGCCAAATGATGTTTGACTCAGATGGAAATTTAATGCATGCATCATTCGAAATCATTAATGTCATAGGTACTGGAATTAGGAGAGTTGGATATTGGTCTGAAATCTTTAGCCTTGACACTGGGGAAGGTCCTAATCATTCCAATTCTAGTCAAGGACTATATCCTGTCATCTGGCCTGGGCAAACACCTCAAACCCCACTTGCCACAATTGAGGGCACTGAAATGTTTAGTGGTTATTGCATAGATGTGTTTACTGCTGCACTCAACTTGTTGCCTTACCCGGTACCATTCAAGTTTATTCCAGTTGGTGATGGTATAACCAATCCGGCCAATTCAGACCTTCTTCACATGATCACAATTGGTGCCATAAATGCTGCGGTGGGGGAAATTACCATCACTTCAAACAGGACTAAGATAGTGGATTTTACAAAGCCATATATTGAGTTCGGATTAGTTGTTGTGGCACCTATCAAGAAGTTGAAATCCATTGCTTGGGCCTTCCTCACTCATTTCACTCCAATGATGTGGTTTGTGACAGGAATGTTTTTGTTAATGGTTGGCTTTGTTGTGTGGATTTTAGAGCGTGGCACAAATAATGACAGAGACCCTGCTAGAAGACAATTTGTCACCATTATCTGGAGAGAAAACTGTCAGTACCCTTGGTCATTTTTTGCTAATTATATGGTTGTTTGTGGTTCTGATACTAAACTCGAGCCATGTTGCAAAGCTCACCTCCATCCTAACTGTGGAACAACTCTCTTCCTAACCTTGATGGATGGACCAACCAGTGTTGGTGTTGCTGCAATAATAGATGAACGTGCATATATGGAGCTCTTCCTAGCAACCAGATGCATTTTTTTAAGTATA 1233 0.4047 HRLAFYTTRFRFFLVHIYSNELHPRCYNLAHAHTKFGQKTKIYFLVEQIGPEIRSFRAYDTVWVLAYALDSLLKDGGTLSFSNDSSPNMLKGDTLHLDRLRVFVNGSTLLKKILEVNTTGLTGQMMFDSDGNLMHASFEIINVIGTGIRRVGYWSEIFSLDTGEGPNHSNSSQGLYPVIWPGQTPQTPLATIEGTEMFSGYCIDVFTAALNLLPYPVPFKFIPVGDGITNPANSDLLHMITIGAINAAVGEITITSNRTKIVDFTKPYIEFGLVVVAPIKKLKSIAWAFLTHFTPMMWFVTGMFLLMVGFVVWILERGTNNDRDPARRQFVTIIWRENCQYPWSFFANYMVVCGSDTKLEPCCKAHLHPNCGTTLFLTLMDGPTSVGVAAIIDERAYMELFLATRCIFLSI 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01977 411 Gene3D - 286 361 - -
Pste7g01977 411 Pfam Ligated ion channel L-glutamate- and glycine-binding site 191 276 IPR019594 GO:0004970|GO:0016020
Pste7g01977 411 FunFam Glutamate receptor 184 286 - -
Pste7g01977 411 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 43 336 IPR015683 -
Pste7g01977 411 SMART GluR_14 177 410 IPR001320 GO:0015276|GO:0016020
Pste7g01977 411 Gene3D - 170 285 - -
Pste7g01977 411 SUPERFAMILY Periplasmic binding protein-like I 38 155 IPR028082 -
Pste7g01977 411 SUPERFAMILY Periplasmic binding protein-like II 187 303 - -
Pste7g01977 411 Gene3D - 16 135 - -
Pste7g01977 411 Pfam Receptor family ligand binding region 55 145 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01977 Pste-Chr7 18045442 18048072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01977 378 408 Ion Channels AT3G51480 64.516 3.27e-06 47.4