Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01976 TGATATTTGCAGTAAAACACAACATGAGCAAATTTTGGCTTGTTGTTCTTGTGATCCTCTACGGTGGCTTTCCCTCAAAAGCAACCAGTAATGTTTCTACAATACCAAGTGTCGTTAACATTGGGGCACTTTTATCTTTCAACTCAACAATTGGCAAAGTGGCTAAAGTAGCCATACAAGCAGCAGTGGATGACATAAATTCCAATGCAACGATTCTCAATGGAACTATCCTTAATATTTCAATGTTGGACACCAAACTATCCACTGGATTCCTTGGAATCATTGATTCATTTCTATTGATGGAGAGTGATACTGTGGCCATAATTGGTCCACAATACTCAGTCATGGCACATGTGATTTCACACATAGCAAATGAGATGCAAGTGCCTCTACTTTCATTTGCAGCAACAGACCCTACACTGACTTCACTACAGTTTCCATATTTTAGTGATCTATGTCAGATGGCTGCTGTGGCAGAAATCGTGGATCACTTTCAATGGAGAGATGTCATAGCCATTTATGTTGATGATGACCATGGAAGAAATGGGATAGCTGCCTTAGGGGATAAGCTAGCAGAGAAACGTTGTAAAATATCATATAAAGTACCCTTTAAACCAAATAATATAACACGAGAAGAAATAAACAGTGCATTTGTTAAGGTAGCTTTAATGGAGTCTAGGGTAATAGTCCTTCACATATATACTTCTTATGGTCTAGAAGTACTTCATCATGCAGCTCAGTCCCTTGGCATGATGGGAAGTGGTTATGTGTGGATAGCCACAGATTGGCTTTCTACAATACTAGATTCAGACTCATCTTTGTTCACATCTCCAGTCATGAATGACATCCAAGGTGTTATCACCTTGCGCATGCATACACCAGAATCAGACATCAAAAGAAAATTTATTTCTAGGTGGAAAAAACTGAGCCAAAAAGAATATCCTAATGACGACCCTTTTGGGTTAAATGTCTTTGGTCTATATGCCTATGATACAGTTTGGGTGCTTGCTTCTGCACTTGATGCATTTTTTAAGAGTGGGGGGACTTTGCTCTTTTCAAATGATTCAAGTCTAAACATGTTAAGAGGGGACACCCTTAACCTGGATACTATGGGGGTCTTTGTTGATGGTGACATGCTGCGTCAAAAAATTTTAGAAGTGAACAGAACTGGTTTGACAGGTCAAATGGTGTTTAATCCAGATGGAAACTTAGTGCATCCATCATATGAAATCATTAATTTGATAGGCACTGGAGTTAGGAGGATTGGTTATTGGTCTGAAAACTTTGGCCTCCACACTGGGGAAGGTCCTAATCATTCCAATTCTAGTGAAGGACTATATGGTGTCATATGGCCTGGTCAAACAACTCAAACCCCACGTGGTTGGATTTTTGCCAGCAATGGAAGACACTTGAGAATTGGGGTGCCACTTAGAATTAGTTACCATGAGTTTGTGTCAAAAATTGAGGGAACTGATATGTTTGGTGGTTATTGCATAGATGTGTTTACTGCTGCTCTGAACTTGTTACCTTATCCAGTACCCTTCAAGTTTGTTCCATTTGGTGATGGTAAAACTAAGCCGTTAAATTCAGACCTTCTTCACATGATCACAATTGGTGCCTTCGATGCTGTGGTAGGGGACATTACCATTACTACAAACCGAACTAAGATAGTGGATTTTACACAGCCGTATATTGGGTCTGCGCTAGTTGTTGTGGCACCTATCAAGAAGTTGAAATCCAGTGCTTGGGCTTTCCTCACACCATTCACTCCAATGATGTGGTTTGTGACAGGAATGTTTTTCTTAGTGGTTGGAGCTGTTGTGTGGGTTTTAGAGCGTCGAACAAATGATGATTTTAGAGGCCCTACTAGAAGACAATTTGTCACCATTATCTGGTTTAGCTTTTCAACCCTATTTTTTGCACATAGAGAGAAAACTGTCAGCACCCTTGGTCGCTTAGTGCTAATCATATGGTTGTTTGTGGTTTTGATACTCAATTCAAGCTATATTGCAAGCCTCACCTCCATCCTAACAGTGGAACAACTCTCATCCCCAGTTAAAGGAATTGAAAGCTTAGTAATAAGCAATGACCGCATTGGTTTCCTGAGTGGTTCATTTGCTGAGAATTATCTGACTGAGGAGCTCAACATACACAGGTCCAGGCTTGTTCCTCTCAACTCCCCATCAGAATATGAAAAGGCCTTGAAGGATGGGCCAGCTAGTGGTGGTGTTGCTGCAATAATAGATGAACGTGCATACATGGAGCTCTTCCTAGCGACTAGATGTGAATTTGGTATCGTTGGTCAAGAGTTCACCAAGATGGGATGGGGTTTTAGTTTCCCAAGGGAGTCTCCCCTAGCAATTGATATGTCAACTGCCATTCTAAAACTATCAGAGAATGGTGATCTTCAGAGAATTCATGACAAATGGCTAACAAGAAGTGCTTGCAGCTCAGAGGGTGCAAAACAAGGCATAGACCGACTTGAGCTAAAAAGCTTTTGGGGTCTGTTCCTACTTAGTGGCATAGCATGCTTCATTGCTCTCCTTTGCTATGCTATTAGAATGGTCTACCGTTTTAGCAGGCACTCCAGTAGCAACCTTGAATGCTCATCACACTCTGCTCGTCTTCGATCATTCCTTTCCTTTGTCAATGAAAGAGAAGGCGAAGACAAATACAGGACAAAGAGAAGGCGAAAGGAGAAGTGCTCTTGTAGAAAGGTAGTGCATGAAGATGGACATTTGGAGGACTCAACTGTTCATGTCCAAATTGAAAATAATGCCACTGCC 2786 0.4113 MSKFWLVVLVILYGGFPSKATSNVSTIPSVVNIGALLSFNSTIGKVAKVAIQAAVDDINSNATILNGTILNISMLDTKLSTGFLGIIDSFLLMESDTVAIIGPQYSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFSDLCQMAAVAEIVDHFQWRDVIAIYVDDDHGRNGIAALGDKLAEKRCKISYKVPFKPNNITREEINSAFVKVALMESRVIVLHIYTSYGLEVLHHAAQSLGMMGSGYVWIATDWLSTILDSDSSLFTSPVMNDIQGVITLRMHTPESDIKRKFISRWKKLSQKEYPNDDPFGLNVFGLYAYDTVWVLASALDAFFKSGGTLLFSNDSSLNMLRGDTLNLDTMGVFVDGDMLRQKILEVNRTGLTGQMVFNPDGNLVHPSYEIINLIGTGVRRIGYWSENFGLHTGEGPNHSNSSEGLYGVIWPGQTTQTPRGWIFASNGRHLRIGVPLRISYHEFVSKIEGTDMFGGYCIDVFTAALNLLPYPVPFKFVPFGDGKTKPLNSDLLHMITIGAFDAVVGDITITTNRTKIVDFTQPYIGSALVVVAPIKKLKSSAWAFLTPFTPMMWFVTGMFFLVVGAVVWVLERRTNDDFRGPTRRQFVTIIWFSFSTLFFAHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVISNDRIGFLSGSFAENYLTEELNIHRSRLVPLNSPSEYEKALKDGPASGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFSFPRESPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLELKSFWGLFLLSGIACFIALLCYAIRMVYRFSRHSSSNLECSSHSARLRSFLSFVNEREGEDKYRTKRRRKEKCSCRKVVHEDGHLEDSTVHVQIENNATA 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01976 921 SUPERFAMILY Periplasmic binding protein-like II 439 805 - -
Pste7g01976 921 Gene3D - 49 398 - -
Pste7g01976 921 Pfam Bacterial extracellular solute-binding proteins, family 3 522 804 IPR001638 -
Pste7g01976 921 FunFam Glutamate receptor 142 303 - -
Pste7g01976 921 CDD GluR_Plant 463 803 - -
Pste7g01976 921 Gene3D - 574 710 - -
Pste7g01976 921 FunFam Glutamate receptor 458 574 - -
Pste7g01976 921 Gene3D - 751 810 - -
Pste7g01976 921 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 865 IPR015683 -
Pste7g01976 921 Gene3D - 455 573 - -
Pste7g01976 921 Pfam Receptor family ligand binding region 49 408 IPR001828 -
Pste7g01976 921 Pfam Ligand-gated ion channel 805 836 IPR001320 GO:0015276|GO:0016020
Pste7g01976 921 FunFam Glutamate receptor 574 704 - -
Pste7g01976 921 SUPERFAMILY Voltage-gated potassium channels 586 898 - -
Pste7g01976 921 SUPERFAMILY Periplasmic binding protein-like I 27 454 IPR028082 -
Pste7g01976 921 Gene3D - 147 423 - -
Pste7g01976 921 CDD PBP1_GABAb_receptor_plant 32 423 IPR044440 -
Pste7g01976 921 SMART GluR_14 464 805 IPR001320 GO:0015276|GO:0016020
Pste7g01976 921 FunFam Glutamate receptor 700 807 - -
Pste7g01976 921 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 105 133 - -
Pste7g01976 921 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 44 60 - -
Pste7g01976 921 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 321 333 - -
Pste7g01976 921 PIRSF IGluLR_plant 1 920 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01976 Pste-Chr7 18022827 18026787 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01976 5 891 Ion Channels AT3G51480 56.937 0.0 1043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01976 7 18022827 18026787 Pste7g01976 7 18022827 18026787 ECH
Pste7g01976 7 18022827 18026787 Pste1g03383 1 15602788 15607107 ECH
Pste1g03383 1 15602788 15607107 Pste7g01976 7 18022827 18026787 PCT