Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01966 GGCAGAACACACATGCTAAACAGAAAACACAAGTGGTTTTTCCTTTGAAAGTAACAAGATGAGAAAAGTTTGGCTTCTTGTCCTCGTGATGTTCTACCATGGCTTTCTTTCAGGAATGAGCAATGTTTCTACAAGACCAAGTACTGTTAACATAGGGGCACTTATGTCCTTCAATTCAACCATTGGCAGAGTGACTAAAGTTGCTATAGAAGCTGCAATGGATGATATCAATTCAAATGCAACGATTCTCAATGGAACTAAGCTTAATATTTCAATGCTAGACACCAAATTATCCACTGGATTCCTAGGGATCATTAACTCATTAAGATTGATGGAGAATGACACTGTGGCCATAATTGGTCCGCAGTTCTCAGTTATGGCACATATGCAAGTGCCTCTACTTTCATTTGCAGCAACTGATCCTACACTGACTTCACTGCAGTTCCCATATTTTGTTAGGACGACACAGAGTGATCTGTATCAGATGGCTGCTGTGGCAGATATTGTTGACCACTTTCAATGGAGATATGTAATAGCAGTTTACATTGATGATGATCATGGAAGAAATGGGGTAGCTGCATTAGGGGATAAGCTAGAGGAAAAACGTGGTAAAATATCACATAAAGCACCATTCAGGCCTAATAACATTACTCGGGAAGAAATAAACAGTGCATTAGTAAAGATAGCTTTAATGGAATCAAGGGTAATAGTTCTTCACATATACCCTTCTTTTGGTCTAGAAGTACTTAATGTGGCTCAGTCACTTGGCATGATGGGAAGTGGTTACGTGTGGATAGTCACAGATTGGCTTTCCACACTACTAGATTCTAACCCATCATTGTTCTCATCTCAAGCTATGAATGACATCCAAGGTGTAATCACCTTGCGCATGTATACCCCCGAGTCAGAAATCAAAAGAAAGTTTAGTTCTAGGTGGAAAAAACTTAGCCTAGAAAAGGATCCTGAAGAGGGTCCTTTTGCATTGAACACCTATGGCCTTTACGCCTATGACACTGTTTGGATGCTTGCTTCTGCACTCGATGCTTTTTTTAAGAGTGGTGGAACTTTGTCATTTTCTAATGATTCAAGCCTAAACATGTTAAGGGGGGACACCCTTCACCTAGATACTATGGGGGTCTTTGTTGATGGTGGCTTGTTGCTTCAAAAAATTTTAGAAGTGAACAGAACAGGTTTAACAGGTCAAATGATGTTTGGTCCAGATGGAAACTTAGTGCATCCATCATACGAAGTCATTAACGTGATAGGCACTGGAATTAGGAGGATTGCTTATTGGTCTGAGACCTCTGGCCTCCACACTGGGGAAGCTCCTAATCATTCCAATTCTAGTGAAGGACTATATGGTGTCATATGGCCTGGTCAAACAACTCAAACCCCACGTGGTTGGGTTTTTACCAGCAATGGAAGACATTTGAGAATTGGGGTGCCACTTAGAATTAATTACCGTGAGTTTGTGTCAAGAACTGAGGGGACTGAGATGTTTGGTGGTTATTGCATAGATGTGTTTACTGCTGCCCTCAACTTGTTGCCTTATCCTGTTCCCTACAAGTTTGTTCCAGTTGGAGACGGTAAAACCAACCTACAAAATACAAAACTTCTTAGCATGGTGACAATTGGGAAGTTTGATGCTGTTGTGGGGGACATTACCATTACTACAAGCCGAACTAAGATAGTAGATTTTACACAACCATATATTGAGTCTGGGCTAGTTGTTGTGGCACCTATCAAGAAATTGAAATCCAGTGCTTGGGCTTTCCTGAGACCATTCACTCCAATGATGTGGTTTGTTACAGGAATGTTTTTCTTAGTTGTGGGAGCTGTTGTGTGGATTTTAGAACGTCGCTTAAATGACGAATTTAGAGGCCCAGCAAGAAGGCAATTTGTGACCATTATATGGTTTAGCTTTTCAACCCTCTATATTGCAAGCCTCACCTCCATCCTAACCGTGGAGAAACTCTCTTCCCCAGTTAAGGGAATTGAAAGCTTAACAACAAGTAACGAACGCATTGGTTTCCAAAGTGGCTCTTTTGCTGAAAATTATCTTACAGAAGAGCTCAACATACACAGATCAAGGCTTGTTCCTCTCAACTCCCCATCAGACTATGAAAAGGCATTGAAGGATGGACCTGCTAATGGGGGTGTCACTGCAATAATAGATGAACGTTCTTACATGGAACTGTTCCTGGCTACCAGATGTGAATACAGTATTGTTGGCCAAGAGTTCACCAAAATGGGATGGGGCTTTGCATTCCCAAGAGATTCTCCCCTAGCAATTGACATGTCCACTGCCATATTAAAACTATCAGAAAATGGTGACCTTCAGAGAATTCATGACAAATGGCTAACAAGAAGTGCTTGCAGCTCGGAGGGTGCAAAGCAAAACATAGATAGACTTGAGCTAGAAAGCTTCTGGGGTCTGTTCCTTCTGATTGGCATAGCATGCTTCATTGCTCTCCTTTGCTATTTTATTAAAATGGCCTACGGTTTCAGAAGACACTCCAATGGTAACCCTGGGGGCTCATCAAACAATGCTCGTCTTCGATCATTCTTTACCTTTGTCAATGAAAGAGAAGAGGAAGACAGAAACATGTCAAAGAGAAAACGATCCGAAAAGGGGTCTAGTGGAAGGGTGGCTCATGAAGATGGATTGGATGGTTCAAGTGTTAGTGTCCATTAGTGAAAATGAT 2705 0.4148 MRKVWLLVLVMFYHGFLSGMSNVSTRPSTVNIGALMSFNSTIGRVTKVAIEAAMDDINSNATILNGTKLNISMLDTKLSTGFLGIINSLRLMENDTVAIIGPQFSVMAHMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMAAVADIVDHFQWRYVIAVYIDDDHGRNGVAALGDKLEEKRGKISHKAPFRPNNITREEINSALVKIALMESRVIVLHIYPSFGLEVLNVAQSLGMMGSGYVWIVTDWLSTLLDSNPSLFSSQAMNDIQGVITLRMYTPESEIKRKFSSRWKKLSLEKDPEEGPFALNTYGLYAYDTVWMLASALDAFFKSGGTLSFSNDSSLNMLRGDTLHLDTMGVFVDGGLLLQKILEVNRTGLTGQMMFGPDGNLVHPSYEVINVIGTGIRRIAYWSETSGLHTGEAPNHSNSSEGLYGVIWPGQTTQTPRGWVFTSNGRHLRIGVPLRINYREFVSRTEGTEMFGGYCIDVFTAALNLLPYPVPYKFVPVGDGKTNLQNTKLLSMVTIGKFDAVVGDITITTSRTKIVDFTQPYIESGLVVVAPIKKLKSSAWAFLRPFTPMMWFVTGMFFLVVGAVVWILERRLNDEFRGPARRQFVTIIWFSFSTLYIASLTSILTVEKLSSPVKGIESLTTSNERIGFQSGSFAENYLTEELNIHRSRLVPLNSPSDYEKALKDGPANGGVTAIIDERSYMELFLATRCEYSIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQNIDRLELESFWGLFLLIGIACFIALLCYFIKMAYGFRRHSNGNPGGSSNNARLRSFFTFVNEREEEDRNMSKRKRSEKGSSGRVAHEDGLDGSSVSVH 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01966 878 CDD GluR_Plant 458 768 - -
Pste7g01966 878 SUPERFAMILY Periplasmic binding protein-like II 434 770 - -
Pste7g01966 878 CDD PBP1_GABAb_receptor_plant 31 418 IPR044440 -
Pste7g01966 878 SMART AABind_6 457 771 IPR001638 -
Pste7g01966 878 Pfam Ligand-gated ion channel 770 801 IPR001320 GO:0015276|GO:0016020
Pste7g01966 878 FunFam Glutamate receptor 665 772 - -
Pste7g01966 878 SMART GluR_14 459 770 IPR001320 GO:0015276|GO:0016020
Pste7g01966 878 Gene3D - 138 418 - -
Pste7g01966 878 Gene3D - 569 626 - -
Pste7g01966 878 Gene3D - 648 772 - -
Pste7g01966 878 Pfam Receptor family ligand binding region 48 403 IPR001828 -
Pste7g01966 878 MobiDBLite consensus disorder prediction 844 878 - -
Pste7g01966 878 Gene3D - 449 568 - -
Pste7g01966 878 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 30 844 IPR015683 -
Pste7g01966 878 FunFam Glutamate receptor 453 569 - -
Pste7g01966 878 FunFam Glutamate receptor 138 297 - -
Pste7g01966 878 Gene3D - 48 393 - -
Pste7g01966 878 SUPERFAMILY Periplasmic binding protein-like I 26 449 IPR028082 -
Pste7g01966 878 MobiDBLite consensus disorder prediction 844 865 - -
Pste7g01966 878 Pfam Bacterial extracellular solute-binding proteins, family 3 467 769 IPR001638 -
Pste7g01966 878 PIRSF IGluLR_plant 625 871 IPR017103 -
Pste7g01966 878 PIRSF IGluLR_plant 1 627 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01966 Pste-Chr7 17951613 17960315 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01966 1 854 Ion Channels AT1G42540 54.107 0.0 978