Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01960 TGAAAATGTAAGACCCACACAACACACCACCCTTCAGAGAACATTGCAAGAAGCAAAAGAAAGCAGAGAGAAAAAAGTGGAGGATTGTTCTCGTCATTTTTGAGAAGGCCACACACACACCCTTCCATCTCCGAAACAAAAGCTTCAAATTTCGGTCACAATTTAAAGAAAAGGGGATTTATTTAAAATCTTAAAAGAAAAAAAAAGAACAGAACAAAACTTGGGGTGTGCCAAAACAGAGGAAGAAGAAGAGGAGGAAGAGGAAGGTGAAAAGGAATCGTTTTGAACGAAAAAGGTGAAGTTTTTTTAATAGATCAGAGATGATGTCTTGTTCTTCTTCATCTGGATCTGAAGAGGATGATGAGGGGTTCGACTCCTACCGGAAAGGAGGATATCACGCCGTCAGAATCGCCGATCAGTTCGCCGGAGGAAGGTACATAGCGCAGAGGAAACTGGGTTGGGGTCAGTTTTCAACAGTTTGGCTTGCCTATGATACTTCAACATCTGCATATGTTGCTCTCAAGATCCAGAAAAGTGCAGCCCAGTTTGTTCAGGCCGCCCTTCATGAAATTGATGTTCTTTCATCCCTTTCTGATGGTGCTGATATGAATTCAAAATGTGTTGTCAAGTTGATTGACAACTTTAAGCACACAGGTCCTAATGGTCAGCACCTTTGCATGGTGCTTGAGTTTCTTGGGGATACTTTGCTTCGTCTAATCAAATATAACCGGTATAAAGGCCTTCCAATGGATAAAGTTAGGGAGATTTGCAAGTGCATTTTGATTGGTTTGGATTATTTGCATAGAGAACATGGTGTTATCCACACAGACCTAAAGCCAGAAAATGTTCTTCTGGTTTCTACTATTGATCCTTCCAAAGATCCTGTTAGATCTGGACTGGCCCCAATATTAGAGAGGCCTGAAGGAAGTGTAAATGGTGGAGTTACTAGTCTTATTGAGAAAAAGTTGAAAAGAAGAGCTAGGAGGGCAGTTGCTAAAATATCTGGGAGAAATAATTCAATAGGAGGAGAAATGGAAGCTCCAAAATCTGAGAGAAATATTGATGGGATTGATGTGAGATGCAAAGTGGTAGATTTTGGAAATGCTTGTTGGGCTGATAAACCGTTTGCTGAAGAAATTCAAACTAGACAGTACAGAGCTCCTGAAGTAATACTGCAGGCTGGTTATTCCTTCTCTGTTGACATGTGGTCTTTTGCTTGTATTGCTTTTGAGCTTGCAACTGGTGATATGCTGTTTACTCCCAAGGTTGGACAAGGTTTTAGTGAGGATGAGATTGCTACTGCTGGAGCAAAATCCAAGGATTTCTTTGACAGACATGGGGATCTCAAAAGGATTCGAAGACTAAAGTTTTGGCCACTAAACAAATTGTTGATTGATAGATATAAATTTTCAGAAAGTGATGCTAATGAGTTTTCAGAGTTTCTTTTACCACTTCTCGATTTTGCCCCCGAGAAGCGGCCAACGGCACAGCAGTGCCTGCAACATCCATGGCTCCTGGGCATTGAGTCTACAGCAAATGAAATGAGAAATGAATCTAATGTGGAAAAAGTGGATGTTGGAATGAGCAACCTTAAAATCAAGGTGGGAAAGTGAAGACAAAGGTATTTGACAGTCACCCTACATGACCCTTTACCATGAATGACTATTGATTGTACTTTGTTTTTGGTTTGATAAAATTAATAAGATTTATTGTTTTATTGGATTAACTACTACAGAGATGTAAATTAGTAAAGAATTTTTTTTCCAGAGATATCTGAGACAATGTGTGTATATTTTTACCCACACGATTTAAATAGATGATGCCATTCATCCAAATCAA 1839 0.3948 MMSCSSSSGSEEDDEGFDSYRKGGYHAVRIADQFAGGRYIAQRKLGWGQFSTVWLAYDTSTSAYVALKIQKSAAQFVQAALHEIDVLSSLSDGADMNSKCVVKLIDNFKHTGPNGQHLCMVLEFLGDTLLRLIKYNRYKGLPMDKVREICKCILIGLDYLHREHGVIHTDLKPENVLLVSTIDPSKDPVRSGLAPILERPEGSVNGGVTSLIEKKLKRRARRAVAKISGRNNSIGGEMEAPKSERNIDGIDVRCKVVDFGNACWADKPFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSEDEIATAGAKSKDFFDRHGDLKRIRRLKFWPLNKLLIDRYKFSESDANEFSEFLLPLLDFAPEKRPTAQQCLQHPWLLGIESTANEMRNESNVEKVDVGMSNLKIKVGK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01960 430 ProSiteProfiles Protein kinase domain profile. 39 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g01960 430 ProSitePatterns Protein kinases ATP-binding region signature. 45 68 IPR017441 GO:0005524
Pste7g01960 430 Gene3D Phosphorylase Kinase; domain 1 15 121 - -
Pste7g01960 430 Gene3D Transferase(Phosphotransferase) domain 1 122 398 - -
Pste7g01960 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pste7g01960 430 SUPERFAMILY Protein kinase-like (PK-like) 33 405 IPR011009 -
Pste7g01960 430 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 8 225 - -
Pste7g01960 430 SMART serkin_6 39 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g01960 430 FunFam SRSF protein kinase 2 isoform X3 228 400 - -
Pste7g01960 430 Pfam Protein kinase domain 253 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g01960 430 Pfam Protein kinase domain 40 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g01960 430 FunFam Protein kinase superfamily protein 25 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01960 Pste-Chr7 17879600 17884811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01960 5 398 EF-hand Containing Proteins AT5G22840 47.845 3.67e-150 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pste7g01960 Pkinase 9.9e-21 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03373 1 15551460 15556314 Pste7g01960 7 17879600 17884811 PCT