Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01950 TACTGTTGTCAAGTAGAAGAGGGCTGGTCAAAGAATATTAGCTACTCAAATGTGGCTTCAGTGAAAAAACTGAACAAAGAGGATTTATCCAAACAATCAAGCACTAGAAATAATGCACCAAGCCTTGTGGCAAGGTTGATGGGAATAGACACCATGCCATTACCATTAGAGACTAAATACGTTGTTCCAATAGATGAAAGCAAACATGAAAATATGGAAAGGAAGTTTTCAAAGAAAGGAAGGAATGGAAGGGGTTTGGTTGGTAAGGGCTCCTCCAACGTGAGTTCTTTTAGTCAAATGGAATTTGGTTCATTTTATCAAGACATTGATGCTGATGATGGATGGGGACAAAATTTTGGAAAACCAAAGACAAGGGAACATCCTCAGGAAGAGGAACTCCAGAAATTCAAGAAAGAATTTGAAGCATATCAAGCAGAAAGCTTTAAGGAGAGGTCAAAGGTTGTTGAATTGGGAAGTGGTTCTATGAGAATGCTTTCTCAAGAGAACCTGATCAAGGAAAAGATGAAGTATATTGCATGTCCAAAGACAGATAGCCACTCATTTAAGACAAAGCTACCTAATGGTGATTTGATGGAGCCAATCTCAACTAAGACAAAAGAATCCTTTCCCACAAGAAGTAAAACACTAAGTAGAGACTTTGATGAGTCTTTAAAGATGAAACCTAAAAGCAGATTAGATATATGTGCTTCTCCCACTCAGATAGTTATCTTGAAGCCTGGTTCTGATAGGATTTGCAATTGCAACCACGAAGAGAATTGCATCAGTTTATCAGGCCCTTTACATGGGAGAAAAGGTATAGAAAATTTTCTTGAGGAAGTGAGAGAGCGGTTGAAATATGAACTGCAAGGAATTAGAGCTAGTGGAATTCGGACACCTTACAATGGAAAACCATCTGATGCTAAAGAGGTCAGAGAAGGTGTCACAAGAGATGCTGACCCAAATTTACTCCGCTCAGAATCAACAAGATCATACAATAGTAAAATGCAGCTCAACGGACCAAGTTCCCCAGAATTTTTCAACATAGATACCAGGAGATTCTTGTCAGAGAGGCTAAGAAATATTGTAAAAAGTGAACTGCATTTGGAAATTCCTGAAGTGGCTTGTTATTTAGACAATGACAATGTTAGACTAAGGCAAGATACCATAAGGTGTGCAAATGACAAAAGCCAGTGGGGAATTTTGAAAGAGAAAAAAGAATTACAAACAGGCTCCTATAGACGTAAATTAGATGACAGTGTATTGTTCCACAAGGAGTTGTCTCCTAGGAACCTTGAAAGATCCTTGTCTGCTCCTGCATCAGGAACATCATTTGGGAGGCTTCTTCTAGAGGACCGCAACATTTTAACCGGCGCCCTTATTCAAAGGAAGCTTGAAGCTGACGAAAAAATGCTTGTGGAAGTTAAAAAGCAGAAGAAAGATGGATTTAATTTTAAAGAAAAACTTTCCAATTTTAAAAATACTCTTGGTCTAAGAGGGAAACTGTTTAGCAAAAGGGTTCAGTCAGTAGTAGAATCACATGGCAGTGAATATGGTCCAATTTTGAGAGGTATCAGAAGCGGACCTACTGTTCTCATGAAATATGGTGAGAGACATGAGAACTTCACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCTGCGTTCATGAAGAACATTGGAGACAAACTGGATATTCAAGTCTAACACCAACTCCAGATGTATCTTCATTAGATGATATTTTTACTCCCCAGGTTTTCAGAGATATCAGCTCCGGTTTGAATGAGCTAAAGAGGCAACTCAGTCAACTTGATTTCGACTCTGACGACTTCACCACAAAGCAGGAGTCAATCGAGTCTGAATTAGTTCAATTGGATGATCCAACAGAGTCTTATGTAAGAGATCTGCTTGTTGCCTCTGGTTTGTACTTTGGTTCATGGGATAAATCTCTGCTAAGAGGGGACACATTTGCAAAGCCTATTGGCAACTCAGTTTTTGAAGAAGTGGAAGAGTCTCATAAGGAATTGATCAAGGAGAATGAAAGATCCACAAAGGATTCGAACAAGTTAGATCACAAGGTTTTGCATGATTTGTTAAATGAGGCACTTTCCGTTGTTCTTGGACCTCCTTTGACATTGTCTAGATTCAGAAGGAAAGTAAGCAATTCCTCCATGCAGCCTCCACCGTGTGGAAATGAACTACTGAAGTTAGTATGGGACATTGTCAGTGTTTCCTTATATCCTACATCTGACACATCTCCTTATACACTTGATAGTTTGGTGGCACAAGATATGGGATCTATCTCCTGGTCTGGACTGACAAATGATCAGATTGATACAATAGAAAGAGAGATGGCATGTCTAATCAGTGATGACTTGGTTGAAGAATTCACAAAGGATATGCTCTTTAATCGTACTGTGAAGTATCATTTTGCACTTTGTTAA 2442 0.3923 YCCQVEEGWSKNISYSNVASVKKLNKEDLSKQSSTRNNAPSLVARLMGIDTMPLPLETKYVVPIDESKHENMERKFSKKGRNGRGLVGKGSSNVSSFSQMEFGSFYQDIDADDGWGQNFGKPKTREHPQEEELQKFKKEFEAYQAESFKERSKVVELGSGSMRMLSQENLIKEKMKYIACPKTDSHSFKTKLPNGDLMEPISTKTKESFPTRSKTLSRDFDESLKMKPKSRLDICASPTQIVILKPGSDRICNCNHEENCISLSGPLHGRKGIENFLEEVRERLKYELQGIRASGIRTPYNGKPSDAKEVREGVTRDADPNLLRSESTRSYNSKMQLNGPSSPEFFNIDTRRFLSERLRNIVKSELHLEIPEVACYLDNDNVRLRQDTIRCANDKSQWGILKEKKELQTGSYRRKLDDSVLFHKELSPRNLERSLSAPASGTSFGRLLLEDRNILTGALIQRKLEADEKMLVEVKKQKKDGFNFKEKLSNFKNTLGLRGKLFSKRVQSVVESHGSEYGPILRGIRSGPTVLMKYGERHENFTEVPPSPASVCSCVHEEHWRQTGYSSLTPTPDVSSLDDIFTPQVFRDISSGLNELKRQLSQLDFDSDDFTTKQESIESELVQLDDPTESYVRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVFEEVEESHKELIKENERSTKDSNKLDHKVLHDLLNEALSVVLGPPLTLSRFRRKVSNSSMQPPPCGNELLKLVWDIVSVSLYPTSDTSPYTLDSLVAQDMGSISWSGLTNDQIDTIEREMACLISDDLVEEFTKDMLFNRTVKYHFALC 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01950 813 Coils Coil 665 685 - -
Pste7g01950 813 Pfam DUF761-associated sequence motif 39 53 IPR032795 -
Pste7g01950 813 MobiDBLite consensus disorder prediction 190 214 - -
Pste7g01950 813 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 801 - -
Pste7g01950 813 Pfam Domain of unknown function (DUF4378) 630 795 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01950 Pste-Chr7 17787553 17790666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01950 21 800 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 37.042 9.16e-127 394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01950 7 17787553 17790666 Pste7g01950 7 17787553 17790666 ECH
Pste1g03366 1 15511691 15517740 Pste7g01950 7 17787553 17790666 PCT