Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01942 TTAGATTCAGATTTATATATGAATATGGCTCCTGTTTCATTGCCTCCTGGGTTTAGGTTCCACCCCACCGATGAAGAACTCGTTTCTTACTACCTCAAAAGAAAGATAAATGGTCGTAAGATTGAGTTAGAGATCATCCCTGAAGTTGATCTTTATAAGTGTGAACCATGGGACTTACCAGGGAAATCCTTGTTACCGGGAAAAGATTTGGAGTGGTATTTCTTCAGCCCTCGAGATAGGAAGTACCCAAATGGATCAAGAACCAATCGTGCAACAAAATCTGGGTATTGGAAGGCCACAGGGAAAGACCGAAAGGTGAACTCTCAGAGTGGTGCAATAGGAATGAAGAAAACCCTAGTTTACTATCGAGGTAGGGCACCACACGGTTGTCGCACTGGTTGGGTTATGCATGAGTACCGTCTAGACGAGACACAGTGCGAAACTAATTCTGGCTTGCAGGATGCATATGCTCTTTGCCGTGTGTTCAAGAAGACCGCAGTGATTCCCCCAAAAGTAGGAGATCAGCAGCACTATGTTAATGTAAGCAGCCATGCAAATCAGATGACAAGTGATCAATCTTCAAACATAGAGCTATACTCTGAAGGAAGAGGTGAACTTTCAGAGAGCTCAAATTATTTGATGCCAAACATAAACGCTGCTGCTCTCAATATAAATGCTGGGACAGCAAGGGATAACCCTACATGGTCACAATTCTTATCAGAAGACTTCCTCAATCTTCCAACATCTACTCCTTTTCCCAATTATGGACCTATCAGTTACCCTCCATCAAAGGTGGATATAGCGCTAGAGTGTGCAAGGATGCAGCATAGGTTTAGCATGCCTCCATTGGAGGTACAGGAGTTCCCTCAAGTTGGCATTTCGGAGCTGAAAATGGGACAGGCATCGGGTTCCATGTGTGGAATTAGCAGAAACGAAACAGATATATTGCAGGAAATTCTTTCAGTTGCTCATGCTTCCCAGGAATTAATAAACCAATCCAACTACTCATCACAGCCATTGGGTGTCAATGAAAGTAATTATGCTCCTCATGAAAGTGATTTTACTTTTATGGTTGCCAGCAATTACAATCATGTGAATGACATGAACACCGTGGGATTTCTTGACAAAGCATGGGAAGACCCAAATGTAAGATCAATCGAGATCGGAGATCTTGATGATGGATTCAAGACAGAGAGGATGGTCGAGAATTTAAGATGGGTTGGAATGTCCAGCAAAAATATGGAAAAGGGCTCTATGGAAGAGCAAAAGATTGTTCCAGTTGAGCATATCTCAAACTTCCAAACTAACAGGGAAGAAAACGAAGTGCAAGGATCTGAGCAAAATAATAGCAACATCAATGATACTGAAATCGATGATTTCTCAATGGGATTCATCAATGATGATGGTCATAATGAGAACTTCATAGATGAGGGTAACATTGATTATTCAAATCCAACCAACTTTGAGGTTGTTGAGGAAACAAAAGTAAGTCATGGAATGTTTGTCTCCACGCGTCAAGTAGCTGATACATTCTTTCATCAAATAGCTCCTTCACAAACCCTCAAAGTTCAACTCAATCCAGTAATGGATGACAATGAATCTATAGAGAATGCAGTAATGGTTAACCAAGGCCCCTCTTTCTTTAGAAAGTTTAAGGCCTATGTGATGGGGAAGCTGATAAAGCCATCAAACACAATAGCAAGTGCCCTTGTAATCACCTTTGCACTTTTGTTGATGCATTGTGTTTTTGTGAAGGAACAAGCCGTGGAAGATTGGAAATCAGATCTCATGTGCTGTGGTAGTGCTAACACCATGAAGAAAATAAGGCAACCAGCTGAGACTGTCATATGGAATGAAAAAGAACAATTTTTGTTTGTTGGTATCAAATGTGGGAAAGGATTTAGTGTGGTCCTGAAGAAGATAGGCATTTTCCTTACCATATCATTGGCTATTTGTACCATGTGGGCTAACCATGTCGTAGTTGACTCTTAG 1992 0.4121 LDSDLYMNMAPVSLPPGFRFHPTDEELVSYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSGAIGMKKTLVYYRGRAPHGCRTGWVMHEYRLDETQCETNSGLQDAYALCRVFKKTAVIPPKVGDQQHYVNVSSHANQMTSDQSSNIELYSEGRGELSESSNYLMPNINAAALNINAGTARDNPTWSQFLSEDFLNLPTSTPFPNYGPISYPPSKVDIALECARMQHRFSMPPLEVQEFPQVGISELKMGQASGSMCGISRNETDILQEILSVAHASQELINQSNYSSQPLGVNESNYAPHESDFTFMVASNYNHVNDMNTVGFLDKAWEDPNVRSIEIGDLDDGFKTERMVENLRWVGMSSKNMEKGSMEEQKIVPVEHISNFQTNREENEVQGSEQNNSNINDTEIDDFSMGFINDDGHNENFIDEGNIDYSNPTNFEVVEETKVSHGMFVSTRQVADTFFHQIAPSQTLKVQLNPVMDDNESIENAVMVNQGPSFFRKFKAYVMGKLIKPSNTIASALVITFALLLMHCVFVKEQAVEDWKSDLMCCGSANTMKKIRQPAETVIWNEKEQFLFVGIKCGKGFSVVLKKIGIFLTISLAICTMWANHVVVDS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01942 663 SUPERFAMILY NAC domain 7 164 IPR036093 GO:0003677|GO:0006355
Pste7g01942 663 Gene3D NAC domain 23 167 IPR036093 GO:0003677|GO:0006355
Pste7g01942 663 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Pste7g01942 663 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 274 - -
Pste7g01942 663 ProSiteProfiles NAC domain profile. 14 164 IPR003441 GO:0003677|GO:0006355
Pste7g01942 663 FunFam Nac domain-containing protein 86 23 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01942 Pste-Chr7 17703623 17707645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01942 9 654 NAC Transcription Factor Family AT1G65910 44.807 6.11e-165 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste7g01942 NAM 2e-40 No_clan